Monarch geneset OGS2.0

DPOGS207913
TranscriptDPOGS207913-TA840 bp
ProteinDPOGS207913-PA279 aa
Genomic positionDPSCF300931 - 494-4384
RNAseq coverage273x (Rank: top 40%)
Annotation
HeliconiusHMEL0108268e-2560.00% 
BombyxBGIBMGA001698-TA3e-6062.63% 
DrosophilaCCS-PB3e-6255.26% 
EBI UniRef50UniRef50_F4WKV51e-6749.00%Copper chaperone for superoxide dismutase n=12 Tax=Coelomata RepID=F4WKV5_ACREC
NCBI RefSeqXP_001600582.12e-6950.00%PREDICTED: similar to copper chaperone for superoxide dismutase [Nasonia vitripennis]
NCBI nr blastpgi|1565493084e-6850.00%PREDICTED: copper chaperone for superoxide dismutase-like [Nasonia vitripennis]
NCBI nr blastxgi|1565493085e-6854.75%PREDICTED: copper chaperone for superoxide dismutase-like [Nasonia vitripennis]
Group
Gene OntologyGO:00047843.3e-90superoxide dismutase activity
GO:00551143.3e-90oxidation-reduction process
GO:00068011.1e-50superoxide metabolic process
GO:00468721.1e-50metal ion binding
KEGG pathwaynvi:1001160177e-69 
 K04569 (CCS)maps-> Amyotrophic lateral sclerosis (ALS)
InterPro domain[21-267] IPR0241423.3e-90Superoxide dismutase copper chaperone
[21-267] IPR0241343.3e-90Superoxide dismutase (Cu/Zn) / chaperones
[65-253] IPR0014241.1e-50Superoxide dismutase, copper/zinc binding domain
Orthology groupMCL14572 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS207913-TA
ATGATACCATCTAAGCTGGAAGTGCTCGTTGACTTTGGGCCGACCCCAGACAAAGTGACCGTTGAAAAGACTCTCAACTACCTGAACGCCCAAGACGATGTTCAGCAGGCAGTATTTAAGAATGGAGCAGTCATGGTAGAGACGGTGTTACCGAGTTCCGTCGTCTTGGATATGGTGATTAAGACATCGGGGAAGAGGGCTGTTCTTCAAGGATATGGGGACAGTACGTCAGCCGTAGCTATGGTCTCGAGCAAGTGCACCACGGAGCAAGTGCTCGGCGTCATACGCTTCACTCAGACGGACAGCGTCTTGATAGCTGACGGTAGTGTGGACGGCCTTACTCCAGGCCTACACGGACTACACGTGCACGAGAGTGGGGATTTGAGCATGGGTTGCTCCTCTATTGGCGATCACTACAACCCGCTGTCGTCACCTCACGGATCACCCGCCGATCCGCCGTCTGAGAGGCACGCGGGTGATCTGGGGAACATACACGCTGACGAACAAGGACGCGCCAGGTTCAGGATATTTGATAGTGTGCTGCAGATAGACGAGCTGCTGGGTAGGTCGGTGGCAGTCACCCAGCGAGCGGACGACCTCGGCCGGGGCTCGAGCCCCTGTTCAAAAATCAACGGTGACTCCGGACCCCCCATCGCGTGCGGCGTAATAGCTAGATCCGCGGGTATTTTCCAAAACGCCAAGCGGATATGCGCCTGTGATGGCGTCGTGGTCTGGGATGAGAAGGATAGACCTCTGGCGGGGAAAGGACGGCGGTTGAAGGATGATAAAGAGCAGACTGGGAGTGGGAAGTGCGGGGGAAAGACGTGCTGCAAGGTCTAG

Protein sequence:

>DPOGS207913-PA
MIPSKLEVLVDFGPTPDKVTVEKTLNYLNAQDDVQQAVFKNGAVMVETVLPSSVVLDMVIKTSGKRAVLQGYGDSTSAVAMVSSKCTTEQVLGVIRFTQTDSVLIADGSVDGLTPGLHGLHVHESGDLSMGCSSIGDHYNPLSSPHGSPADPPSERHAGDLGNIHADEQGRARFRIFDSVLQIDELLGRSVAVTQRADDLGRGSSPCSKINGDSGPPIACGVIARSAGIFQNAKRICACDGVVVWDEKDRPLAGKGRRLKDDKEQTGSGKCGGKTCCKV-