| DPOGS208032 | ||
|---|---|---|
| Transcript | DPOGS208032-TA | 894 bp |
| Protein | DPOGS208032-PA | 297 aa |
| Genomic position | DPSCF300203 - 61808-64269 | |
| RNAseq coverage | 672x (Rank: top 19%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL004051 | 8e-157 | 86.53% | |
| Bombyx | BGIBMGA001500-TA | 4e-135 | 82.73% | |
| Drosophila | mRpL2-PA | 4e-99 | 66.28% | |
| EBI UniRef50 | UniRef50_Q9VTF8 | 5e-97 | 66.28% | Mitochondrial ribosomal protein L2 n=26 Tax=Neoptera RepID=Q9VTF8_DROME |
| NCBI RefSeq | XP_001658945.1 | 4e-106 | 64.07% | mitochondrial ribosomal protein L2 [Aedes aegypti] |
| NCBI nr blastp | gi|354549505 | 2e-115 | 78.88% | mitochondrial ribosomal protein L2 [Antheraea yamamai] |
| NCBI nr blastx | gi|354549505 | 3e-115 | 78.88% | mitochondrial ribosomal protein L2 [Antheraea yamamai] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 1.6e-106 | ribosome | |
| GO:0006412 | 1.6e-106 | translation | ||
| GO:0005622 | 1.6e-106 | intracellular | ||
| GO:0003735 | 1.6e-106 | structural constituent of ribosome | ||
| KEGG pathway | tmt:Tmath_1930 | 1e-25 | ||
| K02886 (RP-L2, rplB) | maps-> | Ribosome | ||
| InterPro domain | [1-285] IPR002171 | 1.6e-106 | Ribosomal protein L2 | |
| [164-285] IPR008991 | 3.5e-31 | Translation protein SH3-like | ||
| [162-268] IPR022669 | 8e-27 | Ribosomal protein L2, C-terminal | ||
| [159-230] IPR014722 | 3e-20 | Translation protein SH3-like, subgroup | ||
| [70-150] IPR022666 | 4.3e-17 | Ribosomal Proteins L2, RNA binding domain | ||
| [46-146] IPR012340 | 2.6e-14 | Nucleic acid-binding, OB-fold | ||
| [67-158] IPR016027 | 3.3e-13 | Nucleic acid-binding, OB-fold-like | ||
| Orthology group | MCL14409 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS208032-TA
ATGGCTTTGAACAGATTATTCGCAGGCTTAAGTCTAACTATATCACCACACGTAGTTGGTCGAAGAGCCATACAAGTAGCAGCAGTTAATTATGCAAGTAAACCTAACATTGTCAAGCCGAAACCAGGATTTGGTAAAAGTTACAGAAGAATCGTGCATTTCCCTGAAGAATATACCGTAAAACCATTAGAAGTGACTAATCTGGCCGGAAGAGATCCTGTGTCAGGACGAGTAGTAGCAAAAGGTATCGGCGGCGGGATAAAACACAAATACCATTGGATTAATTGGGTCAGGGATGGCCCTACAGAAGGCCCGCCACAAGAAGAAAAAGTTATTGAGATAATTGAATGCGGTTGCAGAACGTCTCATGTAGCTTTAGTAGCTGTTGGGGATAAGCTTAAATATATTTTAGCTACAGAGAATATGAAAGCGGGTGATATTATTAAGTCCTCACGTTACTTACCCAGAATACCTGTGAGAGCTAATGAGGGTGATGCATATGTCCTTGGAGCTTTGCCGACCGGTACAATAGTACATTGTATAGAAAAAGAACCAGGTCAAGGTGGATTATACATACATGCAGCGGGAACGTTTGGTACAATACTCCGAAGACAGGATGACAGGATCATAGTTCAGATGCCATCAAAGAGATTGTTCAGTTTTAATGAACATTGCATGGCTGTTGTCGGTCGTCTGTCCAATGTTGACCATGGTAATACCCCGATAGGCTCCCCTCAGAGGAACAGGTGGCTCGGTAACAGACCACGATCTGGACTCTGGAAGAGGAAGGATGGAAGACACGGAAGGAAAATCAGACCACCCAAACCCGTCAAGGAGATATTCCATCCCTCAAACTTCCCTCTACCCACTGTTAATATGACCATGCATCATTAG
>DPOGS208032-PA
MALNRLFAGLSLTISPHVVGRRAIQVAAVNYASKPNIVKPKPGFGKSYRRIVHFPEEYTVKPLEVTNLAGRDPVSGRVVAKGIGGGIKHKYHWINWVRDGPTEGPPQEEKVIEIIECGCRTSHVALVAVGDKLKYILATENMKAGDIIKSSRYLPRIPVRANEGDAYVLGALPTGTIVHCIEKEPGQGGLYIHAAGTFGTILRRQDDRIIVQMPSKRLFSFNEHCMAVVGRLSNVDHGNTPIGSPQRNRWLGNRPRSGLWKRKDGRHGRKIRPPKPVKEIFHPSNFPLPTVNMTMHH-