DPOGS208051 | ||
---|---|---|
Transcript | DPOGS208051-TA | 273 bp |
Protein | DPOGS208051-PA | 90 aa |
Genomic position | DPSCF300203 + 290380-290722 | |
RNAseq coverage | 11845x (Rank: top 1%) |
Annotation | ||||
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Heliconius | HMEL017808 | 1e-30 | 69.57% |   |
Bombyx | % |   | ||
Drosophila | mRpL34-PA | 2e-14 | 60.78% |   |
EBI UniRef50 | UniRef50_A9NLY5 | 1e-28 | 66.67% | 50S ribosomal protein L34 n=1 Tax=Picea sitchensis RepID=A9NLY5_PICSI |
NCBI RefSeq | XP_001960859.1 | 1e-14 | 54.55% | GF11289 [Drosophila ananassae] |
NCBI nr blastp | gi|116780354 | 6e-28 | 66.67% | unknown [Picea sitchensis] |
NCBI nr blastx | gi|116780354 | 4e-28 | 66.67% | unknown [Picea sitchensis] |
Group | ||||
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Gene Ontology | GO:0005840 | 5.5e-18 | ribosome | |
GO:0006412 | 5.5e-18 | translation | ||
GO:0005622 | 5.5e-18 | intracellular | ||
GO:0003735 | 5.5e-18 | structural constituent of ribosome | ||
KEGG pathway |   | |||
InterPro domain | [37-90] IPR000271 | 5.5e-18 | Ribosomal protein L34 | |
Orthology group | MCL17067 |   | Patchy |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS208051-TA
ATGTCTAGGCTTCTGAGCGCGGTTTTCCAACCACTACGGTTTATGACCAACACTTTAAAAACATTTGGGCAATGTTCGCCAAATACTAGTTTAGTTAAGCCTGAATATCCTTTATTAGCTTCTGTAAGGACCAAAGTTCGCTGTTATTTCCCACGACCGAATGAAGTTAGACGAGTCAGGCGTCACGGTTGGAATACCAGGATATCGACCCCAAATGGAAGGAGAGTTATTATGAGACGACTATTAAAAGGGAGATTTGTTTTAACCCATTGA
>DPOGS208051-PA
MSRLLSAVFQPLRFMTNTLKTFGQCSPNTSLVKPEYPLLASVRTKVRCYFPRPNEVRRVRRHGWNTRISTPNGRRVIMRRLLKGRFVLTH-