Monarch geneset OGS2.0

DPOGS208068
TranscriptDPOGS208068-TA702 bp
ProteinDPOGS208068-PA233 aa
Genomic positionDPSCF300282 - 79727-81417
RNAseq coverage128x (Rank: top 57%)
Annotation
HeliconiusHMEL0033473e-2960.92% 
BombyxBGIBMGA007741-TA1e-3359.80% 
DrosophilaLsm10-PA2e-1226.92% 
EBI UniRef50UniRef50_E9GKQ58e-1942.15%Putative uncharacterized protein n=1 Tax=Daphnia pulex RepID=E9GKQ5_DAPPU
NCBI RefSeqXP_974885.12e-1840.54%PREDICTED: similar to AGAP006140-PA [Tribolium castaneum]
NCBI nr blastpgi|3214687383e-1842.15%hypothetical protein DAPPUDRAFT_304272 [Daphnia pulex]
NCBI nr blastxgi|2700105653e-1838.33%hypothetical protein TcasGA2_TC009983 [Tribolium castaneum]
Group
KEGG pathway 
InterPro domain[117-196] IPR0109208.1e-14Like-Sm ribonucleoprotein (LSM)-related domain
[122-184] IPR0011631.3e-08Like-Sm ribonucleoprotein (LSM) domain
[120-185] IPR0066491.6e-06Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type
[9-91] IPR0148072.6e-06Cytochrome oxidase assembly protein 1
Orthology groupMCL17743 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS208068-TA
ATGCAAATCGCGGGTTGGGGTGGTGTTATAGTTGCTTCAACTGGATTTTTCTTACAAAATAGACTTATTGAGAACATAAGAAATACAGAGCATTATAAAGATGCTTTGAAGACCTTAAGATTAAATGTTGGGGCTGTTCACTATCTTGGAGAACCAATAAAGGACAAAAGAATTAAATTAACTGACAGTGAAAATAACAACGCCGATGAGACTAGCGCTAGATTTTGTGTGCCTGTAACTGGTCCAAAAGACAAAGGTCAGCTTTTATTACAGTTAAACAACCACACATTTCAATATTACATCAGGATGTTTGTCGGAACATCAAGAGAGAAATTCTTTTATCACAATACCCTACTATGCCTTGTTAAATCTTTACAAAACCGTAATATAACAGTTGATCTCAGAGATGATTCGTATGTATGTGGTCATCTTGATACGGTGGATGGCTTCATGAACCTTTCACTTAGCAAAGCTGTTTATTGTGATACGCGACAGAATGAATTCCTATTTGAGAACTTTTTCATTCAAAGTAGAAATATTAGATATGTTCACATACCAGAAGATATATCTATCATAGACAATATTAAAAATGAAGTCCATAAGGAAAATATGAAACATACTAACCCAAAACCAAAAAAGTCAAGGAAAGCAACAAAGGCTCTTCAACAGCATATGAAAACGGTTGCAATGTTGGAGAAATGA

Protein sequence:

>DPOGS208068-PA
MQIAGWGGVIVASTGFFLQNRLIENIRNTEHYKDALKTLRLNVGAVHYLGEPIKDKRIKLTDSENNNADETSARFCVPVTGPKDKGQLLLQLNNHTFQYYIRMFVGTSREKFFYHNTLLCLVKSLQNRNITVDLRDDSYVCGHLDTVDGFMNLSLSKAVYCDTRQNEFLFENFFIQSRNIRYVHIPEDISIIDNIKNEVHKENMKHTNPKPKKSRKATKALQQHMKTVAMLEK-