| DPOGS208069 | ||
|---|---|---|
| Transcript | DPOGS208069-TA | 774 bp |
| Protein | DPOGS208069-PA | 257 aa |
| Genomic position | DPSCF300282 - 70926-72254 | |
| RNAseq coverage | 29530x (Rank: top 0%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL003345 | 1e-146 | 99.22% | |
| Bombyx | BGIBMGA007743-TA | 7e-146 | 98.44% | |
| Drosophila | RpL8-PA | 3e-128 | 85.55% | |
| EBI UniRef50 | UniRef50_P62917 | 9e-110 | 78.91% | 60S ribosomal protein L8 n=528 Tax=root RepID=RL8_HUMAN |
| NCBI RefSeq | NP_001037141.1 | 2e-144 | 98.44% | ribosomal protein L8 [Bombyx mori] |
| NCBI nr blastp | gi|315115441 | 4e-144 | 99.22% | ribosomal protein L8 [Euphydryas aurinia] |
| NCBI nr blastx | gi|315115441 | 2e-146 | 99.61% | ribosomal protein L8 [Euphydryas aurinia] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 1.2e-170 | ribosome | |
| GO:0006412 | 1.2e-170 | translation | ||
| GO:0005622 | 1.2e-170 | intracellular | ||
| GO:0003735 | 1.2e-170 | structural constituent of ribosome | ||
| KEGG pathway | nvi:100118050 | 2e-134 | ||
| K02938 (RP-L8e, RPL8) | maps-> | Ribosome | ||
| InterPro domain | [1-258] IPR002171 | 1.2e-170 | Ribosomal protein L2 | |
| [99-247] IPR008991 | 5.7e-53 | Translation protein SH3-like | ||
| [97-227] IPR022669 | 1.2e-37 | Ribosomal protein L2, C-terminal | ||
| [170-245] IPR014726 | 7.7e-30 | Ribosomal protein L2, domain 3 | ||
| [2-98] IPR016027 | 1.1e-23 | Nucleic acid-binding, OB-fold-like | ||
| [90-167] IPR014722 | 1.6e-22 | Translation protein SH3-like, subgroup | ||
| [1-86] IPR012340 | 1.5e-20 | Nucleic acid-binding, OB-fold | ||
| [14-90] IPR022666 | 7.7e-18 | Ribosomal Proteins L2, RNA binding domain | ||
| Orthology group | MCL15079 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS208069-TA
ATGGGTCGTGTGATTCGGGCTCAGCGTAAAGGTGCCGGTTCAGTTTTCGTGTCACATACCAAGAAAAGGAAAGGAGCACCAAAGCTCCGATCTTTGGACTATGCTGAACGTCATGGCTACATAAAGGGAGTAGTTAAGGACATCATTCATGACCCCGGTAGAGGAGCCCCGTTAGCGGTTGTACACTTCCGTGACCCCTACAAGTTTAAGACGCGTAAAGAACTCTTCATCGCACCCGAGGGTCTTTATACTGGACAATTCGTTTACTGCGGCAAGAAAGCCACACTTGAAGTTGGAAATGTGATGCCCGTGGGAGCTATGCCTGAGGGTACCATTGTGTGCAACCTCGAAGAGAAGATGGGTGATCGAGGCCGGTTAGCACGTGCCTCTGGTAACTTTGCTACTGTTATTGGCCACAACCCTGATGCTAAACGCACAAGGGTGAAGCTTCCTTCTGGTGCAAAGAAAGTTCTGCCTTCTAGCAACAGAGGAATGGTTGGTATTGTTGCTGGCGGTGGACGTATTGACAAGCCCATCCTGAAGGCTGGTCGTGCATACCATAAGTACAAGGTGAAGCGTAACTGCTGGCCATATGTCCGTGGTGTGTCCATGAACCCAGTAGAGCATCCTCACGGAGGTGGTAACCATCAACACATTGGTAAGGCTTCGACTGTCAAGAGAGGTACATCCGCTGGTCGCAAGGTTGGTCTCATTGCTGCCCGCAGGACCGGAAGAATTCGTGGAGGCAAGACCGAGGCAAAGAAGGAAGCGTAA
>DPOGS208069-PA
MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVSMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRTGRIRGGKTEAKKEA-