Monarch geneset OGS2.0

DPOGS208185
TranscriptDPOGS208185-TA996 bp
ProteinDPOGS208185-PA331 aa
Genomic positionDPSCF300207 + 179369-182504
RNAseq coverage1444x (Rank: top 9%)
Annotation
HeliconiusHMEL0157174e-16793.66% 
BombyxBGIBMGA012780-TA7e-16792.45% 
DrosophilaScsalpha-PB2e-13177.04% 
EBI UniRef50UniRef50_Q945223e-12977.04%Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial n=1048 Tax=root RepID=SUCA_DROME
NCBI RefSeqXP_001652260.15e-14178.79%succinyl-CoA synthetase small subunit, putative [Aedes aegypti]
NCBI nr blastpgi|3085128031e-14391.67%succinyl-CoA synthetase alpha subunit [Biston betularia]
NCBI nr blastxgi|3085128031e-15591.67%succinyl-CoA synthetase alpha subunit [Biston betularia]
Group
Gene OntologyGO:00081527.9e-183metabolic process
GO:00038247.9e-183catalytic activity
GO:00054886.9e-56binding
KEGG pathwayaag:AaeL_AAEL0068332e-140 
 K01899 (LSC1)maps-> Citrate cycle (TCA cycle)
    Propanoate metabolism
InterPro domain[17-326] IPR0058107.9e-183Succinyl-CoA ligase, alpha subunit
[157-322] IPR0161029.7e-70Succinyl-CoA synthetase-like
[35-156] IPR0160406.9e-56NAD(P)-binding domain
[37-132] IPR0037812.4e-31CoA-binding
[184-308] IPR0058118.4e-23ATP-citrate lyase/succinyl-CoA ligase
Orthology groupMCL12676 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS208185-TA
ATGGCTTTACCGGTACGGATTTTGTCTCGCTGCAAAGATGGCTTAAAGCTTGGCAGCATCAGATACGCAAGTTCAACTCCATATGCTGAGACAAGAAAAAACTTAGTTCTCACGAATGAGACTAAAGTTATCGTACAAGGTTTCACTGGCAAACAGGGTACCTTCCACAGCCAGCAAGCTCTTGATTATGGCACCAATATTGTGGGAGGTGTGTCACCAAAGAAAGCTGGTAGTGAACATCTCGGAAAGCCTGTATTTGGTTCCGTCAAGGATGCTAAGGAGAAGACAGGAGCTGAAGCTACTGTAATCTATGTTCCACCTCCCGGAGCAGCAGCTGCTATTCTAGAAGCCATTGAAGCTGAAATGCCTCTGATTGTGTGCATCACAGAGGGAGTACCACAACATGACATGGTTCGCGTTAAACACGCCCTGCTCCGTCAGAACAAGTCGCGTCTGGTCGGACCAAACTGCCCAGGTATTATCGCTCCTGAGAAGTGCAAGATCGGTATTATGCCGGCCGCGGTTCACAAAAAAGGTTGCATTGGTGTTGTGTCACGTTCAGGCACCTTGACCTATGAAGCCTGCCATCAGACCACCGTTACTGGTCTAGGTCAAACGCTTTGTGTCGGTATCGGCGGTGACCCCTTCAACGGAACCGATTTCATTGATTGCCTTGAAGTGTTCCTGAAGGACCCAGAGACTAAAGGCATTATACTCATCGGTGAAATCGGAGGCAACGCCGAGGAATTGGCTTCTGAATATTTGACACAGCACAACACTGGTCAAAAAGCCAAGCCTGTGGTTTCATTCATTGCCGGTCTGACAGCTCCGCCAGGTAGAAGAATGGGTCATGCTGGGGCTATTATTTCCGGCGGAAAAGGTGGAGCCATGGATAAAATCAAAGCTCTAGAGAAAGCCAACGTCATTGTCACCCGTTCTCCCGCCAAAATGGGTGTTGAACTTCTCAAGGAAATGAAAAGATTAGAAATTGTTTAA

Protein sequence:

>DPOGS208185-PA
MALPVRILSRCKDGLKLGSIRYASSTPYAETRKNLVLTNETKVIVQGFTGKQGTFHSQQALDYGTNIVGGVSPKKAGSEHLGKPVFGSVKDAKEKTGAEATVIYVPPPGAAAAILEAIEAEMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGIIAPEKCKIGIMPAAVHKKGCIGVVSRSGTLTYEACHQTTVTGLGQTLCVGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGNAEELASEYLTQHNTGQKAKPVVSFIAGLTAPPGRRMGHAGAIISGGKGGAMDKIKALEKANVIVTRSPAKMGVELLKEMKRLEIV-