| DPOGS208197 | ||
|---|---|---|
| Transcript | DPOGS208197-TA | 567 bp |
| Protein | DPOGS208197-PA | 188 aa |
| Genomic position | DPSCF300179 - 269724-271858 | |
| RNAseq coverage | 15286x (Rank: top 1%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL008682 | 7e-83 | 93.62% | |
| Bombyx | BGIBMGA002309-TA | 3e-74 | 86.17% | |
| Drosophila | Nlp-PA | 1e-24 | 49.07% | |
| EBI UniRef50 | UniRef50_Q2F5N9 | 4e-72 | 86.17% | Nucleoplasmin isoform 2 n=9 Tax=Endopterygota RepID=Q2F5N9_BOMMO |
| NCBI RefSeq | NP_001040261.1 | 9e-73 | 86.17% | nucleoplasmin isoform 2 [Bombyx mori] |
| NCBI nr blastp | gi|114052609 | 1e-71 | 86.17% | nucleoplasmin isoform 2 [Bombyx mori] |
| NCBI nr blastx | gi|114052609 | 1e-89 | 86.17% | nucleoplasmin isoform 2 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003676 | 1.2e-57 | nucleic acid binding | |
| KEGG pathway | ||||
| InterPro domain | [1-163] IPR004301 | 1.2e-57 | Nucleoplasmin | |
| [1-109] IPR024057 | 3.4e-34 | Nucleoplasmin core | ||
| Orthology group | MCL15701 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS208197-TA
ATGTCGGACGAATATTTCTACGGTGTCACTCTCTCGTCATCACATCAGTCCGAGACATGGGACCCCGAAGCAAAGGCGGAATACCCGCGAAGCAACAAATTACTCATCCGCCAAGCACTCCTAGGTCCGGACGCGAAACCTGACGAACTTAACGTCGTTCAGGTAGAGACGATGTGTCTCCAAGAATCTATAAAAATCCCAGTTGCCATCTTAAAAGTTGGTGAAACAAGACAAGCACGTCTGGATATTGAGTTCCCAGATGCACCGGTCACCTTCACCCTTATACAGGGCTCGGGGCCGGTTCACTTAATTGGGCAACACTTGTTGGGTGCCCTCGTGGAAGAGTTTGAGGATATGGAGGAAATGGAAGAGGAGATGTTAGACGAAGAGGAAGGTGAAGACTCTCAGTTCAAGGAAGATGACAATAAAAGGAAAGCGTCATCTGGCAAACGCAAGGGAAATGAGGACGAGGACGAGGACGAGGCGGAACCAAAGGGCAAGAAGGCGAAAATGTCGAACAACGCTAAAGGCAAGGCTCCTTCCCCCAAGAAGAACGCCAAGAAGTGA
>DPOGS208197-PA
MSDEYFYGVTLSSSHQSETWDPEAKAEYPRSNKLLIRQALLGPDAKPDELNVVQVETMCLQESIKIPVAILKVGETRQARLDIEFPDAPVTFTLIQGSGPVHLIGQHLLGALVEEFEDMEEMEEEMLDEEEGEDSQFKEDDNKRKASSGKRKGNEDEDEDEAEPKGKKAKMSNNAKGKAPSPKKNAKK-