DPOGS208225 | ||
---|---|---|
Transcript | DPOGS208225-TA | 615 bp |
Protein | DPOGS208225-PA | 204 aa |
Genomic position | DPSCF300079 - 583617-584648 | |
RNAseq coverage | 22844x (Rank: top 0%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL007925 | 3e-114 | 97.55% |   |
Bombyx | BGIBMGA006414-TA | 3e-113 | 96.57% |   |
Drosophila | RpL15-PE | 8e-97 | 83.82% |   |
EBI UniRef50 | UniRef50_Q0D287 | 1e-90 | 77.94% | Ribosomal protein L15 n=20 Tax=Eukaryota RepID=Q0D287_DANRE |
NCBI RefSeq | NP_001037162.1 | 9e-112 | 96.57% | ribosomal protein L15 [Bombyx mori] |
NCBI nr blastp | gi|342356469 | 1e-111 | 97.55% | ribosomal protein L15 [Heliconius melpomene cythera] |
NCBI nr blastx | gi|342356469 | 2e-113 | 97.55% | ribosomal protein L15 [Heliconius melpomene cythera] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0005840 | 1.2e-170 | ribosome | |
GO:0006412 | 1.2e-170 | translation | ||
GO:0005622 | 1.2e-170 | intracellular | ||
GO:0003735 | 1.2e-170 | structural constituent of ribosome | ||
KEGG pathway | tca:657702 | 3e-106 |   | |
  | K02877 (RP-L15e, RPL15) | maps-> | Ribosome | |
InterPro domain | [2-205] IPR000439 | 1.2e-170 | Ribosomal protein L15e | |
[1-195] IPR012678 | 2.8e-97 | Ribosomal protein L23/L15e | ||
Orthology group | MCL11654 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS208225-TA
ATGGGCGCTTACAGATATATTCAAGAGTTGTATCGTAAAAAGCTGAGCGATGTTATGCGTTTTCTCTTGCGTATCAGAGTTTGGCAATACCGCCAGTTGACTCGCATGCACCGCGCTCCTAGGCCTACTAGGCCCGACAAAGCCAGAAGATTGGGATACCGCGCTAAGCAAGGTTTCGTCATCTTCAGAATTCGCGTTCGCCGTGGTGGCCGTAAGCGCCCAGTCGCTAAGGGAGCCACCTACGGCAAACCCAAGAGCCACGGTGTCAACCAATTGAAACCAACCCGTAACCTACAGTCTATTGCTGAGGAGCGTGTCGGCCGTCGCTGTGGAGGTCTTCGCGTACTTAACTCATATTGGGTAGCACAAGATTCCTCATACAAATACTATGAAGTCATCCTCGTTGATCCTTCACACAAGGCTATACGCCGTGATCCCAAGATCAACTGGATCGTGAACGCGGTTCACAAGCATCGTGAAATGCGTGGTCTCACTTCCGCTGGAAAGAGCTCACGTGGTCTCGGCAAGGGTCATCGTTACTCTCAAACCAAGGGAGGTTCACGCCGCGCGGCCTGGATCAGACGCAACACATTGCAACTGCGTCGCAAGCGATAA
>DPOGS208225-PA
MGAYRYIQELYRKKLSDVMRFLLRIRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGFVIFRIRVRRGGRKRPVAKGATYGKPKSHGVNQLKPTRNLQSIAEERVGRRCGGLRVLNSYWVAQDSSYKYYEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRYSQTKGGSRRAAWIRRNTLQLRRKR-