Monarch geneset OGS2.0

DPOGS208317
TranscriptDPOGS208317-TA1050 bp
ProteinDPOGS208317-PA349 aa
Genomic positionDPSCF300293 + 120915-123983
RNAseq coverage337x (Rank: top 34%)
Annotation
HeliconiusHMEL0057831e-11460.40% 
BombyxBGIBMGA002208-TA2e-13968.73% 
DrosophilamRpL1-PA5e-9554.37% 
EBI UniRef50UniRef50_Q9VHT57e-9354.37%LD31571p n=14 Tax=Diptera RepID=Q9VHT5_DROME
NCBI RefSeqXP_002013406.14e-9553.91%GL23426 [Drosophila persimilis]
NCBI nr blastpgi|1951448448e-9453.91%GL23426 [Drosophila persimilis]
NCBI nr blastxgi|1949040312e-9853.13%GG24696 [Drosophila erecta]
Group
Gene OntologyGO:00037238.9e-32RNA binding
GO:00159348.9e-32large ribosomal subunit
GO:00064128.9e-32translation
GO:00037358.9e-32structural constituent of ribosome
GO:00058404.4e-10ribosome
GO:00056224.4e-10intracellular
KEGG pathwaytde:TDE24243e-14 
 K02863 (RP-L1, rplA)maps-> Ribosome
InterPro domain[86-321] IPR0236748.9e-32Ribosomal protein L1, superfamily
[129-312] IPR0021431.4e-16Ribosomal protein L1
[161-250] IPR0160954.4e-10Ribosomal protein L1, 3-layer alpha/beta-sandwich
[251-311] IPR0160941.7e-07Ribosomal protein L1, 2-layer alpha/beta-sandwich
Orthology groupMCL14406 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS208317-TA
ATGGCTGGAATAATATTTCGTTCCTTATTCAATACATCTTTAACATTGAATAAAACTAATATAACAACAATAAGATCCATTAACATCGGCGCAGTATACTATGCGGCTCGTAAGGGAACGAGGGCGAAAGCGAGGGCAAAGAAAGTTAAAGTAGAAATTACAAAAGTCGGTTTTATACCACACAACCAGAGAGGAAAAAATAAAGACACAAAGATACATGTTAATAAGCATTTAGATGATTCGAACAAGCAGATATCGAAGGATGATGTTTACCCAATGCGGTATTATCGTTGGGTAGTGTACACCGCCGAGGAGGCTGTCCTCGCTCACAAGGAAACTCACCATCCAACCATGTACAATGTACCCGATGCACTTGTCTTTGCTCAAGTTGAATTAAATATGGAGGCCGTTAAGAAGAACCGCTACATAGATAACTTCTCCCGTCTAACGCTTCTGCCAAGGATCTTCCCTCGTGATGAGGAGCGTACTATCCTCGCTTTCTGTAAGGGTCCGGAGCTGATCAAACAAGTGGCGGAGGCCGGCGCCACCACCGCCGGCAGTACAGAACTCGTCAAGAAGATACAGGAAGGTTCATTAAAGCTCAGCGACTATGACTATGTGATAGCTCATCCTAATATACTGACGGAACTGGTGCCAATAAGGGGTCTGATGAAGAGAAGGTTCCCCAGTCCCAACAACGGTACACTGGACGCTAATATATGTGATTTGGTGAAGAAGTTTGCCGCCGGAGTACAATACAGAGTTGTTAAGGATGAACACCAACAGAATTTTGGGTCTGTTGAAGTGCCAGTTGGGAGGCTGGACATGGACGCTCAACATATTGTAGAAAATGTTGATGCATTGTTGAAAGATATTCAGTCGGCGCGACCGAAGCGAGAGGGTCTTTTTATAACCAGGTGTTTTATTACAAGTCCGCCCTCAAGCGAGAAACTCAAGATAGATCCATTTGTTCATGTCGACCGAACACTATCTAAGGAAGTACAAGAAGACAGTGATGATGAGGATGAAGCTGTAGCCGCGAGATCATAA

Protein sequence:

>DPOGS208317-PA
MAGIIFRSLFNTSLTLNKTNITTIRSINIGAVYYAARKGTRAKARAKKVKVEITKVGFIPHNQRGKNKDTKIHVNKHLDDSNKQISKDDVYPMRYYRWVVYTAEEAVLAHKETHHPTMYNVPDALVFAQVELNMEAVKKNRYIDNFSRLTLLPRIFPRDEERTILAFCKGPELIKQVAEAGATTAGSTELVKKIQEGSLKLSDYDYVIAHPNILTELVPIRGLMKRRFPSPNNGTLDANICDLVKKFAAGVQYRVVKDEHQQNFGSVEVPVGRLDMDAQHIVENVDALLKDIQSARPKREGLFITRCFITSPPSSEKLKIDPFVHVDRTLSKEVQEDSDDEDEAVAARS-