DPOGS208353 | ||
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Transcript | DPOGS208353-TA | 651 bp |
Protein | DPOGS208353-PA | 216 aa |
Genomic position | DPSCF300251 - 49482-97769 | |
RNAseq coverage | 102x (Rank: top 61%) |
Annotation | ||||
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Heliconius | HMEL008044 | 7e-46 | 56.96% |   |
Bombyx | BGIBMGA014552-TA | 1e-19 | 64.29% |   |
Drosophila | nrm-PE | 2e-26 | 32.20% |   |
EBI UniRef50 | UniRef50_D7EJY4 | 6e-33 | 37.62% | Putative uncharacterized protein n=2 Tax=Tribolium castaneum RepID=D7EJY4_TRICA |
NCBI RefSeq | XP_971833.2 | 6e-33 | 37.56% | PREDICTED: similar to AGAP012343-PA [Tribolium castaneum] |
NCBI nr blastp | gi|270016467 | 2e-32 | 37.62% | hypothetical protein TcasGA2_TC006983 [Tribolium castaneum] |
NCBI nr blastx | gi|270016467 | 2e-32 | 37.62% | hypothetical protein TcasGA2_TC006983 [Tribolium castaneum] |
Group | ||||
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KEGG pathway | ptr:469866 | 9e-08 |   | |
  | K06548 (SN, SIGLEC1) | maps-> | Cell adhesion molecules (CAMs) | |
InterPro domain | [74-160] IPR013783 | 4.5e-09 | Immunoglobulin-like fold | |
[81-139] IPR013151 | 2.5e-07 | Immunoglobulin | ||
Orthology group | MCL26207 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS208353-TA
ATGTCGATATCCCACGAGCCTAATGCCACGTTCGCGGAACTGGTGATCACCAATGTTCATCCTGATGATGAAGGCGTATACCGCTGCGAAATCACCTACCTCCAAGTCGGCGAAGATTGCAACACGGTGCAAGTCACGGACTTCCATACATACATTAAACCGAAATCTGTGGAAGTGAGGACTGGAGAGGGTCTTATTTTGTCCGAGGGCGCCGTGTTTGGACCACTTCTAGAGAGGACGAAGGTTAATATTACGTGCCTGGTTGTAGGTGGCAAGCCTCAACCAAAAGTCACTTGGTATTTCAATGGAAAAGAAAGACTGGATGCCCAAACCATCACCGATCAATCATCGATAAAACATGTACTACCATTGACTGTGACACGAGCGGAGTTAGCTGGTGAACTCACTTGTAATGTGACCTCTGCTGCTATGGACAAGGCTGTGTTGAGAAAGGTTTTGTTGGATGTCAGAGTGCCGCCAAATAAGATCTCTATATCTGGAGTAGGCGAGCATGCTACCCAAGGTACGCTTCTGACGTTGATGTGTACGGTGTCCGGAGCTCGACCAGCGGCGAGGATTGATTGGTTTAATGGCACACACCAGCTTAGTCCAAAACAACAAAATATTCAAGTAAGTATAAAAAAGGAGTAG
>DPOGS208353-PA
MSISHEPNATFAELVITNVHPDDEGVYRCEITYLQVGEDCNTVQVTDFHTYIKPKSVEVRTGEGLILSEGAVFGPLLERTKVNITCLVVGGKPQPKVTWYFNGKERLDAQTITDQSSIKHVLPLTVTRAELAGELTCNVTSAAMDKAVLRKVLLDVRVPPNKISISGVGEHATQGTLLTLMCTVSGARPAARIDWFNGTHQLSPKQQNIQVSIKKE-