| DPOGS208363 | ||
|---|---|---|
| Transcript | DPOGS208363-TA | 534 bp |
| Protein | DPOGS208363-PA | 177 aa |
| Genomic position | DPSCF300724 + 6795-9983 | |
| RNAseq coverage | 875x (Rank: top 15%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009676 | 7e-56 | 77.24% | |
| Bombyx | BGIBMGA008706-TA | 4e-54 | 69.50% | |
| Drosophila | flr-PA | 1e-41 | 60.80% | |
| EBI UniRef50 | UniRef50_Q9VU68 | 1e-39 | 60.80% | Actin-interacting protein 1 n=34 Tax=Pancrustacea RepID=WDR1_DROME |
| NCBI RefSeq | XP_002061632.1 | 9e-42 | 60.80% | GK17082 [Drosophila willistoni] |
| NCBI nr blastp | gi|322788593 | 9e-41 | 58.91% | hypothetical protein SINV_02397 [Solenopsis invicta] |
| NCBI nr blastx | gi|195427131 | 7e-41 | 61.29% | GK17082 [Drosophila willistoni] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005515 | 3.1e-24 | protein binding | |
| KEGG pathway | cdu:CD36_29790 | 5e-11 | ||
| K03130 (TFIID4, TAF5) | maps-> | Basal transcription factors | ||
| InterPro domain | [58-176] IPR015943 | 3.1e-24 | WD40/YVTN repeat-like-containing domain | |
| [57-88] IPR019781 | 7.7e-10 | WD40 repeat, subgroup | ||
| [47-88] IPR001680 | 2e-07 | WD40 repeat | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS208363-TA
ATGACTTATTTTCAAAGTTTAGACTTAGTTCAACAGTTTCGCAAGAATAGAAAGGCATTGCAAAGAAATAAGGAATTTCTGAGAAACAGCAGAACCGAACGAAATGACTCTATTTACGACACTGATCGACCCGGGTGGAGCTGGCTATTCAGACGCTTAATAGGCTCACCGGCTCATAAGGGTGGCGTGTACTGTATCTCGTGGTCGGCGGACGGGAAGCAGCTCCTGTCATGTTCCGGCGACAAGACCTGTGCTATATGGGACGTTGAAACTAGGGAGAGAACGGTCACCTTCAATATGGGAAACGCTGTTGAGAACCAACAGGTGTCCTGTTTATGGCAGAGGGACCACATTATAACAATATCTCTGTCGGGCGACATCACGTACTTGGACCCTTCCAACCCTGAGAAGCCGGTGCGTGTGGTCACGGGCCACAACAAACCCATAACCTGCCTCGCTCTACACGGAACCTCCCTCTTCACAGCCAGTCACGACGGCGTCGTCACGAGGTGGAATGTTAATACTGGTAATTAA
>DPOGS208363-PA
MTYFQSLDLVQQFRKNRKALQRNKEFLRNSRTERNDSIYDTDRPGWSWLFRRLIGSPAHKGGVYCISWSADGKQLLSCSGDKTCAIWDVETRERTVTFNMGNAVENQQVSCLWQRDHIITISLSGDITYLDPSNPEKPVRVVTGHNKPITCLALHGTSLFTASHDGVVTRWNVNTGN-