| DPOGS208368 | ||
|---|---|---|
| Transcript | DPOGS208368-TA | 174 bp |
| Protein | DPOGS208368-PA | 57 aa |
| Genomic position | DPSCF300146 - 156271-156444 | |
| RNAseq coverage | 13772x (Rank: top 1%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | % | |||
| Bombyx | BGIBMGA012356-TA | 7e-24 | 80.70% | |
| Drosophila | CG18624-PC | 5e-11 | 56.36% | |
| EBI UniRef50 | UniRef50_Q5TQN5 | 3e-12 | 63.64% | AGAP000849-PA n=7 Tax=Endopterygota RepID=Q5TQN5_ANOGA |
| NCBI RefSeq | NP_001155264.1 | 3e-22 | 80.70% | hypothetical protein LOC100302108 [Bombyx mori] |
| NCBI nr blastp | gi|239985451 | 7e-21 | 80.70% | uncharacterized protein LOC100302108 [Bombyx mori] |
| NCBI nr blastx | gi|239985451 | 4e-22 | 80.70% | uncharacterized protein LOC100302108 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003954 | 2e-23 | NADH dehydrogenase activity | |
| GO:0005739 | 2e-23 | mitochondrion | ||
| KEGG pathway | dme:Dmel_CG18624 | 6e-09 | ||
| K03957 (NDUFB1) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Parkinson's disease | ||||
| InterPro domain | [8-57] IPR012575 | 2e-23 | NADH:ubiquinone oxidoreductase, MNLL subunit | |
| Orthology group | MCL17418 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS208368-TA
ATGGCTATATTTGGCATAACTACACGGTACCTCTGGATCAGTGTTCCCCTAACTGGATTCTTTATTGGGAAGTATCTTGACGATCAGGAAACTCTTAGAATGACAAACTTCAGAGATAAATCTGCATTGTATGGTGGTAGACTGAAGGAGGGTGATCCACCATCATGGCCTTGA
>DPOGS208368-PA
MAIFGITTRYLWISVPLTGFFIGKYLDDQETLRMTNFRDKSALYGGRLKEGDPPSWP-