| DPOGS208427 | ||
|---|---|---|
| Transcript | DPOGS208427-TA | 492 bp |
| Protein | DPOGS208427-PA | 163 aa |
| Genomic position | DPSCF300095 - 375621-376241 | |
| RNAseq coverage | 154x (Rank: top 53%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | % | |||
| Bombyx | BGIBMGA009032-TA | 4e-21 | 72.13% | |
| Drosophila | % | |||
| EBI UniRef50 | UniRef50_UPI00021A63AB | 8e-10 | 26.52% | UPI00021A63AB related cluster n=3 Tax=unknown RepID=UPI00021A63AB |
| NCBI RefSeq | XP_392618.3 | 2e-13 | 29.08% | PREDICTED: similar to LSM16 homolog (EDC3, S. cerevisiae) [Apis mellifera] |
| NCBI nr blastp | gi|380014636 | 3e-12 | 28.79% | PREDICTED: uncharacterized protein LOC100870259 [Apis florea] |
| NCBI nr blastx | gi|380014636 | 2e-12 | 29.08% | PREDICTED: uncharacterized protein LOC100870259 [Apis florea] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005634 | 5.9e-06 | nucleus | |
| GO:0007049 | 5.9e-06 | cell cycle | ||
| GO:0000775 | 5.9e-06 | chromosome, centromeric region | ||
| GO:0007067 | 5.9e-06 | mitosis | ||
| KEGG pathway | ame:409092 | 5e-13 | ||
| K12615 (EDC3) | maps-> | RNA degradation | ||
| InterPro domain | [15-129] IPR008685 | 5.9e-06 | Centromere protein Mis12 | |
| Orthology group | MCL18347 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS208427-TA
ATGATTAAACTACCATCTTGGACTGGTGGAACAGATGAGGAATATGAAACACAATACTTTGGTTTTGGAGCTCAAAGGCTTAAAATTGCAGTGCGTCAAATGGTTGAACAAAAAATTAGGACAGGAGTAAAAGATATGGAATCTTATTTACAAGAGTCTTTAGATCTTAATGACAAGGATAAGTTAACATTAACACATTCTTGTGACAAACTTATACGGTTGTACTGTGAAGGGGCTGGACCTTCTTTGGATATAATTGACGAAGAGATAGAAAGAGTAATAAATATACCTCCCTATGTTCTCCTACCGGAAGATGAAGTTCAGCTTGAGCAGGTGTCTGACGATGATTATGAAAGGTTAAAGGAAGAGGTCGCAGCTTTAAGAAAAAGAGTAGAAAGAGGAGCTCTTATAGAAGCATTACTTACAGCAGAGGAGGAGGAATTATCATCAGCAGAAAAGGATAAAGATCCAAATGACATATTTGAAGTATAA
>DPOGS208427-PA
MIKLPSWTGGTDEEYETQYFGFGAQRLKIAVRQMVEQKIRTGVKDMESYLQESLDLNDKDKLTLTHSCDKLIRLYCEGAGPSLDIIDEEIERVINIPPYVLLPEDEVQLEQVSDDDYERLKEEVAALRKRVERGALIEALLTAEEEELSSAEKDKDPNDIFEV-