DPOGS208486 | ||
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Transcript | DPOGS208486-TA | 321 bp |
Protein | DPOGS208486-PA | 106 aa |
Genomic position | DPSCF300064 - 1102198-1102719 | |
RNAseq coverage | 1229x (Rank: top 10%) |
Annotation | ||||
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Heliconius | HMEL016440 | 9e-50 | 94.34% |   |
Bombyx | BGIBMGA010337-TA | 2e-33 | 81.33% |   |
Drosophila | Ssb-c31a-PA | 2e-16 | 45.16% |   |
EBI UniRef50 | UniRef50_A9CTQ5 | 4e-36 | 86.59% | Putative RNA polymerase II transcriptional coactivator (Fragment) n=1 Tax=Antheraea yamamai RepID=A9CTQ5_ANTYA |
NCBI RefSeq | XP_001862481.1 | 3e-25 | 54.72% | p31A [Culex quinquefasciatus] |
NCBI nr blastp | gi|162809318 | 2e-35 | 86.59% | putative RNA polymerase II transcriptional coactivator [Antheraea yamamai] |
NCBI nr blastx | gi|162809318 | 9e-37 | 86.59% | putative RNA polymerase II transcriptional coactivator [Antheraea yamamai] |
Group | ||||
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Gene Ontology | GO:0003677 | 1.9e-24 | DNA binding | |
GO:0003713 | 1.9e-24 | transcription coactivator activity | ||
GO:0006355 | 1.9e-24 | regulation of transcription, DNA-dependent | ||
GO:0005488 | 1.3e-23 | binding | ||
KEGG pathway |   | |||
InterPro domain | [27-101] IPR003173 | 1.9e-24 | Transcriptional coactivator p15 | |
[42-104] IPR009044 | 1.3e-23 | ssDNA-binding transcriptional regulator | ||
Orthology group | MCL15144 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS208486-TA
ATGCCTAAAAATAAGAAAAAGGCAGAAAGTTCCAGCAGCGATAGTGATGGTGGTCCTGTAGATAGGAATCCACCGCCTGAAAAAAAAGCCAAAATGGGTTCTAGAACAGATGATAAAGAACCAACATGGGTGCTAGAAGGAAAGAAACTGGTAAAAGTTCGCGAATTTAAGGGAAGAGTCTTTATAGATATAAGAGAATTTTATGAAAAGAATGGTGAACTACTGCCAGGTAAAAAAGGTATTAGTTTGACTCCGGATATGTGGCGAAAGCTTTTGTCATTAGGAGATGAAATTAATGAAACAGTAAGCTCACTTTGTTAG
>DPOGS208486-PA
MPKNKKKAESSSSDSDGGPVDRNPPPEKKAKMGSRTDDKEPTWVLEGKKLVKVREFKGRVFIDIREFYEKNGELLPGKKGISLTPDMWRKLLSLGDEINETVSSLC-