| DPOGS208491 | ||
|---|---|---|
| Transcript | DPOGS208491-TA | 456 bp |
| Protein | DPOGS208491-PA | 151 aa |
| Genomic position | DPSCF300064 - 1025848-1026840 | |
| RNAseq coverage | 4x (Rank: top 89%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL017883 | 3e-58 | 75.52% | |
| Bombyx | BGIBMGA010342-TA | 9e-17 | 39.66% | |
| Drosophila | Gpb5-PC | 5e-27 | 45.83% | |
| EBI UniRef50 | UniRef50_B3XYE2 | 2e-52 | 80.17% | Glycoprotein hormone beta subunit-related protein n=3 Tax=Obtectomera RepID=B3XYE2_BOMMO |
| NCBI RefSeq | NP_001124380.1 | 3e-53 | 80.17% | glycoprotein hormone beta 5 [Bombyx mori] |
| NCBI nr blastp | gi|195963337 | 6e-52 | 80.17% | glycoprotein hormone beta 5 [Bombyx mori] |
| NCBI nr blastx | gi|195963337 | 7e-57 | 78.69% | glycoprotein hormone beta 5 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005576 | 6.9e-32 | extracellular region | |
| GO:0005179 | 6.9e-32 | hormone activity | ||
| KEGG pathway | ||||
| InterPro domain | [7-131] IPR001545 | 6.9e-32 | Gonadotropin, beta subunit | |
| [40-131] IPR006208 | 4.4e-08 | Cystine knot | ||
| Orthology group | MCL17405 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS208491-TA
ATGTTAGATACTAAAAGGTGTTTTAGAATAGTACTGCTGATGATGACAATATGGTGCGTATCAGACGGCGCTAGTTCATCACTCAATAACCGCTGTAAGCTGAAACGATATACACATAAGGCTGTACAAACGGATTTTAACGGTCTTCGGTGTTGGGACGATGTAAAGATTCTCTCATGCTGGGGATTCTGTTTGTCTTATGAGATCGCGCATTGGCAATTTCCATACAAGGAATCTCATCACCCTGTATGTGTCCACGGCGAGAGAAAACATGCCTCTGTCAAACTACGCCATTGCGATGCCGGTGTAGAACCCGGCACTGAATTATACCACTACGTTGAAGCAGTTAATTGCAAATGTCAGGTATGTTCATCAGAAGACACCAGCTGTGAATGGCTTCCACCAGATTCACCTTTTGGAGGTTTAATAAGAGAAGACGTGGATGGAATGGAATAA
>DPOGS208491-PA
MLDTKRCFRIVLLMMTIWCVSDGASSSLNNRCKLKRYTHKAVQTDFNGLRCWDDVKILSCWGFCLSYEIAHWQFPYKESHHPVCVHGERKHASVKLRHCDAGVEPGTELYHYVEAVNCKCQVCSSEDTSCEWLPPDSPFGGLIREDVDGME-