DPOGS208587 | ||
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Transcript | DPOGS208587-TA | 534 bp |
Protein | DPOGS208587-PA | 177 aa |
Genomic position | DPSCF300052 - 1067358-1067891 | |
RNAseq coverage | 2x (Rank: top 92%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL015840 | 1e-87 | 82.78% |   |
Bombyx | BGIBMGA004540-TA | 1e-87 | 80.79% |   |
Drosophila | l(2)efl-PA | 1e-44 | 52.84% |   |
EBI UniRef50 | UniRef50_Q5MGN8 | 7e-75 | 76.88% | Heat shock protein 3 n=7 Tax=Ditrysia RepID=Q5MGN8_LONON |
NCBI RefSeq | NP_001036984.1 | 4e-86 | 80.79% | heat shock protein hsp 19.9 [Bombyx mori] |
NCBI nr blastp | gi|99653648 | 4e-88 | 83.62% | small heat shock protein 19.7 [Chilo suppressalis] |
NCBI nr blastx | gi|99653648 | 2e-86 | 83.62% | small heat shock protein 19.7 [Chilo suppressalis] |
Group | ||||
---|---|---|---|---|
KEGG pathway | dme:Dmel_CG4533 | 7e-43 |   | |
  | K09542 (CRYAB) | maps-> | Protein processing in endoplasmic reticulum | |
InterPro domain | [14-26] IPR001436 | 1.3e-27 | Alpha crystallin/Heat shock protein | |
[63-158] IPR002068 | 2.1e-27 | Heat shock protein Hsp20 | ||
[49-159] IPR008978 | 7.2e-18 | HSP20-like chaperone | ||
Orthology group | MCL25032 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS208587-TA
ATGTCTTTACTACCTTTGCTTTTGGATTATGAATTAGATCGTCCTCGCCGTATTCTGGATCAGCATTTCGGCTTGGGGATATCTCCCGACGATCTTTTGAACGTTGTGTGCGGTCCGACTTTGAGTCGCGATTACTACCGTCCCTGGCGTCATCTTGCAGCGGCTGCAAGGGACGTCGGTTCTAGCATCAAAACTGACAAGGATAAGTTCCAAGTCAACCTAGATGTGCAACATTTCAACCCTGAGGAGATCAGTGTTAAAACATCCGATGGCTATGTGGTGGTGGAAGGGAAGCACGAAGAAAAGAAGGACCAGCATGGATATATTTCGCGTCAGTTTTGTCGCCGGTATGCTCTGCCGGAAGGTTGTGTTCCTGAAACGGTGGAGTCCAGATTGTCGTCTGATGGTGTGCTAACAATTATAGCGCCACGGAAGGTGCCGCCAGCGGTTGAGGGTCAGCGAAATGTTCCGATCACTCAGACTGGGCCTGTGCGTAAGGAGGTCAAGGATCAAGCCAATGGAGACAAGGCTTAA
>DPOGS208587-PA
MSLLPLLLDYELDRPRRILDQHFGLGISPDDLLNVVCGPTLSRDYYRPWRHLAAAARDVGSSIKTDKDKFQVNLDVQHFNPEEISVKTSDGYVVVEGKHEEKKDQHGYISRQFCRRYALPEGCVPETVESRLSSDGVLTIIAPRKVPPAVEGQRNVPITQTGPVRKEVKDQANGDKA-