DPOGS208626 | ||
---|---|---|
Transcript | DPOGS208626-TA | 414 bp |
Protein | DPOGS208626-PA | 137 aa |
Genomic position | DPSCF300052 + 1049112-1049525 | |
RNAseq coverage | 0x (Rank: top 97%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL015849 | 4e-55 | 68.61% |   |
Bombyx | BGIBMGA004630-TA | 1e-31 | 48.31% |   |
Drosophila | l(2)efl-PA | 3e-21 | 40.20% |   |
EBI UniRef50 | UniRef50_D9J2L8 | 3e-25 | 44.63% | Heat shock protein (Fragment) n=1 Tax=Actias selene RepID=D9J2L8_9NEOP |
NCBI RefSeq | NP_001036984.1 | 7e-28 | 45.45% | heat shock protein hsp 19.9 [Bombyx mori] |
NCBI nr blastp | gi|387966741 | 6e-42 | 58.33% | small heat shock protein 15.9 [Spodoptera litura] |
NCBI nr blastx | gi|387966741 | 1e-41 | 58.78% | small heat shock protein 15.9 [Spodoptera litura] |
Group | ||||
---|---|---|---|---|
KEGG pathway | mdo:100026448 | 8e-20 |   | |
  | K09542 (CRYAB) | maps-> | Protein processing in endoplasmic reticulum | |
InterPro domain | [34-127] IPR002068 | 2.9e-23 | Heat shock protein Hsp20 | |
[35-55] IPR001436 | 5.4e-21 | Alpha crystallin/Heat shock protein | ||
[20-128] IPR008978 | 6.3e-17 | HSP20-like chaperone | ||
Orthology group | MCL23337 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS208626-TA
ATGTCACTATGGGCAAGTACTAAACCAATATTTGGAGACGAAATTGTTTTACGTTCTATCGATTGGTTGGAGAATTTTCCTTGGAGAAACGAGACAACAGTTAAAACTGAGAAAGATAAGTATGAAATTCGATTGCATTTAAAAAGTTTTACGCCTGAAGAGATAAGTGTTAAAATACAAGATGGTTTTATAGTTATTGAAGGCAAACACGACGAGAAACAGGACGAAGAAGGTTTTATATCTCGACATTTTGTGAGACGATACGCGATACCCGAAGATTGTCGAATCGAGGCGATACAATCTAGAATGTCCTCTGAAGGAATACTTGTTATCAGTGCTCCAAGGAAACCTGTTGTTCGGCGGGACACTGTGATACCCGTCTCACACGAGGGCAACATTAAATCTAAATTGTAA
>DPOGS208626-PA
MSLWASTKPIFGDEIVLRSIDWLENFPWRNETTVKTEKDKYEIRLHLKSFTPEEISVKIQDGFIVIEGKHDEKQDEEGFISRHFVRRYAIPEDCRIEAIQSRMSSEGILVISAPRKPVVRRDTVIPVSHEGNIKSKL-