| DPOGS208688 | ||
|---|---|---|
| Transcript | DPOGS208688-TA | 339 bp |
| Protein | DPOGS208688-PA | 112 aa |
| Genomic position | DPSCF300043 - 530486-531288 | |
| RNAseq coverage | 46614x (Rank: top 0%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL015214 | 3e-36 | 97.32% | |
| Bombyx | BGIBMGA003412-TA | 2e-34 | 87.50% | |
| Drosophila | RpLP1-PA | 4e-35 | 79.46% | |
| EBI UniRef50 | UniRef50_P08570 | 8e-33 | 79.46% | 60S acidic ribosomal protein P1 n=352 Tax=Eukaryota RepID=RLA1_DROME |
| NCBI RefSeq | NP_001091750.1 | 3e-34 | 87.50% | ribosomal protein P1 [Bombyx mori] |
| NCBI nr blastp | gi|4239713 | 4e-34 | 74.34% | acidic ribosomal protein [Ceratitis capitata] |
| NCBI nr blastx | gi|342356347 | 3e-54 | 97.32% | ribosomal protein P1 [Heliconius melpomene cythera] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 6e-29 | ribosome | |
| GO:0005622 | 6e-29 | intracellular | ||
| GO:0006414 | 6e-29 | translational elongation | ||
| GO:0003735 | 6e-29 | structural constituent of ribosome | ||
| KEGG pathway | dsi:Dsim_GD23023 | 4e-33 | ||
| K02942 (RP-LP1, RPLP1) | maps-> | Ribosome | ||
| InterPro domain | [23-111] IPR001813 | 6e-29 | Ribosomal protein 60S | |
| Orthology group | MCL10635 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS208688-TA
ATGGCATCAAAGGCTGAATTAGCTTGTGTATACTCTGCTCTCATCCTCGTTGACGACGATGTCGCAGTTACCGGTGAGAAAATCTCAACCATCTTGAAGGCGGCTAACGTTGACATCGAGCCATACTGGCCAGGTTTGTTCGCCAAGGCTTTGGAGGGTGTGAACGTTCGTGACCTGATCACTAACATCGGTTCCGGTGTCGGTGCTGCCCCGGCCGGTGGAGCGCCAGCCGCAGCCTCAGCTGCTGCTGCGCCTGCCGCTGAAGCCGCCAAGGAGGAAAAGAAGGAAGAGGAACCCGAAGAGTCTGACGATGACATGGGCTTCGGTCTCTTTGACTAA
>DPOGS208688-PA
MASKAELACVYSALILVDDDVAVTGEKISTILKAANVDIEPYWPGLFAKALEGVNVRDLITNIGSGVGAAPAGGAPAAASAAAAPAAEAAKEEKKEEEPEESDDDMGFGLFD-