DPOGS208710 | ||
---|---|---|
Transcript | DPOGS208710-TA | 297 bp |
Protein | DPOGS208710-PA | 98 aa |
Genomic position | DPSCF300043 - 109535-110429 | |
RNAseq coverage | 549x (Rank: top 23%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL015259 | 2e-25 | 57.47% |   |
Bombyx | BGIBMGA003356-TA | 3e-37 | 75.82% |   |
Drosophila | CG17734-PA | 1e-20 | 51.02% |   |
EBI UniRef50 | UniRef50_Q8INK7 | 3e-18 | 54.02% | CG17734, isoform B n=13 Tax=Diptera RepID=Q8INK7_DROME |
NCBI RefSeq | XP_001653423.1 | 3e-23 | 63.75% | hypothetical protein AaeL_AAEL008723 [Aedes aegypti] |
NCBI nr blastp | gi|157119625 | 7e-22 | 63.75% | hypothetical protein AaeL_AAEL008723 [Aedes aegypti] |
NCBI nr blastx | gi|157119625 | 1e-20 | 63.75% | hypothetical protein AaeL_AAEL008723 [Aedes aegypti] |
Group | ||||
---|---|---|---|---|
KEGG pathway |   | |||
InterPro domain | [24-77] IPR007667 | 1.9e-19 | Hypoxia induced protein, domain | |
Orthology group | MCL11143 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS208710-TA
ATGGCACAAGAAAAACCAACGTTTGACTACCACGAAGAAAGTCACGGCGAAAAGTTAGCTAGAAAATCAAAGGAATCCCCTTTCATGGTCATTGGGTTGGCCAGTCTAGCAGCGGCGGTCGGTTATGGCGTGTATTCCTTCAAGAACCGCGGTCCTATGAGCACCAGCGTTTTCCTGATGCAGTTCCGAGTTATAGCTCAAGGAGCGACCGTGGGTGCGCTCACAGCCGGCATAACTTATTCAATGTACAGCAATTATTTCAACAAAACCAAAGCTGTGTTAAACACAGAGCATTAG
>DPOGS208710-PA
MAQEKPTFDYHEESHGEKLARKSKESPFMVIGLASLAAAVGYGVYSFKNRGPMSTSVFLMQFRVIAQGATVGALTAGITYSMYSNYFNKTKAVLNTEH-