MonarchBase - Protein-coding gene

DPOGS208720
Transcript	DPOGS208720-TA	948 bp
Protein	DPOGS208720-PA	315 aa
Genomic position	DPSCF300043 + 11337-14016
RNAseq coverage	8x (Rank: top 86%)

Annotation
*Heliconius*	HMEL015271	2e-119	65.81%
*Bombyx*	BGIBMGA000813-TA	5e-58	44.82%
*Drosophila*	CG30491-PA	4e-59	42.86%
EBI UniRef50	UniRef50_C4WWA5	1e-90	54.02%	ACYPI007265 protein n=3 Tax=Acyrthosiphon pisum RepID=C4WWA5_ACYPI
NCBI RefSeq	XP_973517.2	1e-92	56.19%	PREDICTED: similar to Retinol dehydrogenase 13 [Tribolium castaneum]
NCBI nr blastp	gi\|270014891	3e-94	56.51%	hypothetical protein TcasGA2_TC010879 [Tribolium castaneum]
NCBI nr blastx	gi\|270014891	9e-96	56.51%	hypothetical protein TcasGA2_TC010879 [Tribolium castaneum]

Group
Gene Ontology	GO:0005488	9.9e-63	binding
	GO:0008152	3.9e-17	metabolic process
	GO:0016491	3.9e-17	oxidoreductase activity
KEGG pathway	cfa:490744	4e-65
	K11153 (RDH12)	maps->	Retinol metabolism
InterPro domain	[10-304] IPR016040	9.9e-63	NAD(P)-binding domain
	[17-159] IPR002198	3.9e-17	Short-chain dehydrogenase/reductase SDR
	[18-35] IPR002347	1.1e-15	Glucose/ribitol dehydrogenase
Orthology group

Nucleotide sequence:

>DPOGS208720-TA
ATGGGTTGGTTTAGTGGACGCTGTTATAGTGATGCAAAATTAAACGGTAAAACAATAATTGTCACCGGATGCAACACCGGAATCGGCAAGGTTACCGTGGAGGAATTTTATAAAAGAGGAGCAAAAGTTATCATGGCCTGTAGAGACGTTGGAAAGGCGGAGGAAGCTAAGATTGATATAAAAGAAACTTGTAAAAATTCACCAAACAAAGGCGAACTCATCGTTGAAGAATGTGACTTATCCTCTTTTAAATCGATTAGAAATTTTAGTCAAAAGGTTCTCAAAAGTAAAACTGAAATTAACGTTTTGGTGAACAACGCTGGAGTGATGATGGCCCCTCGAGGAGAGACGGAAGATGGTTTTGAAACTCATTTCGGTACAAATCACCTCGGACATTTCCTCCTTACAATGCTTTTACTGCCCAGGATAATTAAAAGCACCCCAGCAAGAATAGTTACTGTATCCTCTAAAGCACATTCGTTGTTTAATTTACATTTGGAGGACCTGAACTATACACTAAGACCATATAATTCTGCTGAGGCATATGCACAAAGTAAAATAGCAAATATTTTATTTTCGAGAGAACTATCCAAAAAACTCAAGAGTTACAATATCCAAGGCATAAACACTTACAGCCTCCATCCGGGTTTAATTAAAACTGATTTATATCGACATTTGAATAGCCCGATCAGAAGTTTAATAAGAACCATTGTCGTGGATTACATTTTCTATCCATTTTCGAAAACTATAGAAATGGGAGCTCAAACTACTATTTACTGCGCTATAGATGAAAAATGTTCCAATGAGACCGGTCTTTATTACACTGACTGCACAGTGACGTCACCAAGTACACATGCTCTAAATGATGAGAATGCAAAAAAATTGTGGGATATGTCGATGGAAATGGTGGGATTAAAGGATTGTAATCCATTCACCTCCGTTTATTGA

Protein sequence:

>DPOGS208720-PA
MGWFSGRCYSDAKLNGKTIIVTGCNTGIGKVTVEEFYKRGAKVIMACRDVGKAEEAKIDIKETCKNSPNKGELIVEECDLSSFKSIRNFSQKVLKSKTEINVLVNNAGVMMAPRGETEDGFETHFGTNHLGHFLLTMLLLPRIIKSTPARIVTVSSKAHSLFNLHLEDLNYTLRPYNSAEAYAQSKIANILFSRELSKKLKSYNIQGINTYSLHPGLIKTDLYRHLNSPIRSLIRTIVVDYIFYPFSKTIEMGAQTTIYCAIDEKCSNETGLYYTDCTVTSPSTHALNDENAKKLWDMSMEMVGLKDCNPFTSVY-

Monarch geneset OGS2.0

Nucleotide sequence:

Protein sequence: