Monarch geneset OGS2.0

DPOGS208730
TranscriptDPOGS208730-TA2025 bp
ProteinDPOGS208730-PA674 aa
Genomic positionDPSCF300043 + 116194-118218
RNAseq coverage502x (Rank: top 25%)
Annotation
HeliconiusHMEL0152540.082.35% 
BombyxBGIBMGA003395-TA0.076.25% 
DrosophilaHBS1-PA0.057.54% 
EBI UniRef50UniRef50_Q86NR40.057.39%RE29053p n=20 Tax=Coelomata RepID=Q86NR4_DROME
NCBI RefSeqXP_002134936.10.058.09%GA23522 [Drosophila pseudoobscura pseudoobscura]
NCBI nr blastpgi|1984652490.058.09%GA23522 [Drosophila pseudoobscura pseudoobscura]
NCBI nr blastxgi|1700552750.057.88%eukaryotic peptide chain release factor GTP-binding subunit [Culex quinquefasciatus]
Group
Gene OntologyGO:00055253.5e-47GTP binding
GO:00039243.5e-47GTPase activity
KEGG pathway 
InterPro domain[1-148] IPR0150332e-49Domain of unknown function DUF1916
[247-462] IPR0007953.5e-47Protein synthesis factor, GTP-binding
[567-673] IPR0090018.4e-28Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
[468-564] IPR0090001.9e-23Translation elongation/initiation factor/Ribosomal, beta-barrel
[567-671] IPR0041601.1e-10Translation elongation factor EFTu/EF1A, C-terminal
[491-558] IPR0041613e-07Translation elongation factor EFTu/EF1A, domain 2
Orthology groupMCL13198 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS208730-TA
ATGGCTCGCCACCGTAATGTAAGAAACCGGAGTTATTCTGACGATTATGATTACGACGATGTGTATGGACATTCCGTCGAAGAAGACAGCTGTTTATCACCCAGCGATGCTGATCAGTGGATGTATGATCGGTCTCGTAATCAGCAGGCTATATCCAGCTTCCTGAGTAGCCATAATGATATTCAAGAAGAATCCGAAGACCTGACTGAAGACTCGCACCCGTGCCTCCAGCGTCGCGAGTCCATAGACCTGCGAGGCCTTAACTTAAATGAAGAAGACGAGGCTAAGCTTATGTCATGTTTAGATGAATTGAGAAATGTATTGGGTGATACAGTCCCGGAAAATATCCTTGTGCAAGCAGTGATAAATCACAATTTCAATTTTAATATAGCTTTGGACGAAATTTTGAATAATAATAAGACTAAGGATGAAAAAACTAAGGCAGCTGTAACATTACCTGTTATATTGGAACCTGCTAAGACCCCTGTTATAACCACAGATGTCAAAGTTCCTAAGGTGATAGCTACAAAAGTTGAAACAAGCAAAGCGAATGTGATTAAAGGTTTCAAAATTGATAGTCCTAAAAGTCTTCCACAAACACCTAGAGAACAATCCCCCGCTACCAGAGATAGGACACCATCCAGGACAGATCAAGTCGATGACAGCAAAAGTGTCACAAAATTGAAGGAAAATAAAACAGATCCTAATGTACAGTATTCAAATGAACGGAAATCAGATAAGGACCACTTGTATATTATTGTGATAGGTCATGTTGATGCCGGAAAATCAACTCTAATGGGCCGTATACTGTGTGATTTGGGTGAAGTGAGTCAAAGGACTTTGCATAAATATGAACAGGAGAGTAAGAAGCTCGGGAAACAAAGTTTCATGTACGCTTGGGTGCTCGATGAGACTGGTGAAGAACGATTGAGAGGTATCACAATGGATGTGGGTAGAGCTCAGTTTGAGACAAAAACAAAGAAGGTTATTATATTAGATGCCCCCGGCCACGCTGATTTCATTCCGAACATGATAACGGGTGCTGGCCAGGCCGACGTCGCTTTGTTAGTTGTGGATGCAACACGAGGAGAGTTTGAATCAGGTTTCGATCTTGGCGGACAAACACGAGAACATGCCTTACTTGTTAGATCATTAGGTGTTAATCAGCTTGCGGTGGCAGTCAACAAATTAGATACAAATAATTGGTCCCAAGAAAGATTTAACGAGATAACTACGAAACTAAAATCTTTTCTTAAACAAGCTGGCTTCAAAGATTCAGACGTCACATATGTACCATGTTCAGGTTTGACCGGTGAGAACCTGGTTAAGTCTACTACTGAAGTGGAACTACTCAAATGGTACGATGGCCCATGTCTTCTTGACGTTATCGACAAGTTTAAAGTACCCCAGAGGCCTGTCGCTAAGCCTCTACGTATGTCCATTAACGACGTATTCAAGGGAACCGGATCCGGTTTCTGTGTTGCTGGACGCATAGAGACAGGAGTAATCAACAAGGGAGATAAAGTTCTACTCTGCCCGACCAAGGAAATGGCGGAGATTCGTAGTGTAAGTATAAATGATATGGTCAGCAACGTGGCATTCGCTGGTGATCAGGTCAGTGTGACACTGTCAGGGGTGGAAATGCAGAATGTTTCGATTGGATACGTTTTGAGTGATCCCGTACAGCAGGTGCCGGTGGCTGCGAGGTTTGAGGCCCGTTTGGTAGTTTTCAACGTCAAGGTGCCAATAACTAAAGGGTTCCCGGTCTTAATACATCACCAGTCTTTGGTGGAATCGGCTAGCATAGTCAAACTTAAGGCGTTACTGAATAAAAGTACGGGTGAGGTCCTGAAGAAGAAGCCAAGATGTCTGGGCAATAATTCTGTAGCTGTAGTGGAAATAGAAGTTTGTAGACCGATTTGTATCGAACGGTACAAAGATGTTAAGGAATTGGGTCGGGTCATGCTACGTGTTGCCGGAGTCACTATAGCTGCTGGTCTCGTAACAGATATCCTGAGCATTTGA

Protein sequence:

>DPOGS208730-PA
MARHRNVRNRSYSDDYDYDDVYGHSVEEDSCLSPSDADQWMYDRSRNQQAISSFLSSHNDIQEESEDLTEDSHPCLQRRESIDLRGLNLNEEDEAKLMSCLDELRNVLGDTVPENILVQAVINHNFNFNIALDEILNNNKTKDEKTKAAVTLPVILEPAKTPVITTDVKVPKVIATKVETSKANVIKGFKIDSPKSLPQTPREQSPATRDRTPSRTDQVDDSKSVTKLKENKTDPNVQYSNERKSDKDHLYIIVIGHVDAGKSTLMGRILCDLGEVSQRTLHKYEQESKKLGKQSFMYAWVLDETGEERLRGITMDVGRAQFETKTKKVIILDAPGHADFIPNMITGAGQADVALLVVDATRGEFESGFDLGGQTREHALLVRSLGVNQLAVAVNKLDTNNWSQERFNEITTKLKSFLKQAGFKDSDVTYVPCSGLTGENLVKSTTEVELLKWYDGPCLLDVIDKFKVPQRPVAKPLRMSINDVFKGTGSGFCVAGRIETGVINKGDKVLLCPTKEMAEIRSVSINDMVSNVAFAGDQVSVTLSGVEMQNVSIGYVLSDPVQQVPVAARFEARLVVFNVKVPITKGFPVLIHHQSLVESASIVKLKALLNKSTGEVLKKKPRCLGNNSVAVVEIEVCRPICIERYKDVKELGRVMLRVAGVTIAAGLVTDILSI-