DPOGS208865 | ||
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Transcript | DPOGS208865-TA | 441 bp |
Protein | DPOGS208865-PA | 146 aa |
Genomic position | DPSCF300009 - 1706003-1706443 | |
RNAseq coverage | 30x (Rank: top 76%) |
Annotation | ||||
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Heliconius | HMEL002932 | 4e-65 | 77.24% |   |
Bombyx | BGIBMGA008096-TA | 3e-70 | 83.45% |   |
Drosophila | CG31549-PA | 6e-59 | 73.10% |   |
EBI UniRef50 | UniRef50_F4WC28 | 2e-55 | 70.83% | Tetratricopeptide repeat protein 27 n=2 Tax=Acromyrmex echinatior RepID=F4WC28_ACREC |
NCBI RefSeq | NP_001040155.1 | 2e-65 | 78.91% | short-chain dehydrogenease/reductase-like [Bombyx mori] |
NCBI nr blastp | gi|114050773 | 5e-64 | 78.91% | short-chain dehydrogenease/reductase-like [Bombyx mori] |
NCBI nr blastx | gi|114050773 | 1e-61 | 78.91% | short-chain dehydrogenease/reductase-like [Bombyx mori] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0005488 | 2.6e-45 | binding | |
GO:0008152 | 1.2e-09 | metabolic process | ||
GO:0016491 | 1.2e-09 | oxidoreductase activity | ||
KEGG pathway | cyn:Cyan7425_4436 | 4e-22 |   | |
  | K00034 (gdh) | maps-> | Pentose phosphate pathway | |
InterPro domain | [1-143] IPR016040 | 2.6e-45 | NAD(P)-binding domain | |
[18-34] IPR002347 | 3.6e-26 | Glucose/ribitol dehydrogenase | ||
[1-61] IPR002198 | 1.2e-09 | Short-chain dehydrogenase/reductase SDR | ||
Orthology group | MCL27826 |   | Specific divergent |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS208865-TA
ATGAACACAAACGTACGCGCCCCGTACCAACTAACTATGCTCGCTGTACCATATTTGGTTAAGACTAAAGGGAATATTGTTAATGTATCCAGTGTTGCGGGGTTGAGATCTTTTCCAAATATAGTTGCATATTGCACTTCTAAAGCAGCATTAGATCAGTTTACAAGATGCGTATGTCTTGAACTAGCGCCGAAAGGTGTGAGAGTCAATGCTGTTAATCCTGGTGTGATTGAAACTGGAATTCATTTAAAAGGAGCAATGAATGAAGACGAGTATAAGGCCTATTTGGTTAAATGTAAAGACACTCACGCTTTGGGCAGGAGTGGTAATGTTAAAGAGGTTTCCTCTGTTATAGCCTTTTTGGCTAGCGACGCTGCCAGCAATATCACTGGTGCTACTTTGCCTGTTGATGGAGGCCGACACGCTATGTGCCCAAGTTGA
>DPOGS208865-PA
MNTNVRAPYQLTMLAVPYLVKTKGNIVNVSSVAGLRSFPNIVAYCTSKAALDQFTRCVCLELAPKGVRVNAVNPGVIETGIHLKGAMNEDEYKAYLVKCKDTHALGRSGNVKEVSSVIAFLASDAASNITGATLPVDGGRHAMCPS-