| DPOGS208909 | ||
|---|---|---|
| Transcript | DPOGS208909-TA | 810 bp |
| Protein | DPOGS208909-PA | 269 aa |
| Genomic position | DPSCF300009 - 538291-539657 | |
| RNAseq coverage | 125x (Rank: top 57%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL014669 | 2e-85 | 60.82% | |
| Bombyx | BGIBMGA002482-TA | 3e-119 | 76.64% | |
| Drosophila | Ercc1-PA | 1e-76 | 54.72% | |
| EBI UniRef50 | UniRef50_Q7KMG7 | 2e-74 | 54.72% | Ercc1 n=10 Tax=Diptera RepID=Q7KMG7_DROME |
| NCBI RefSeq | XP_001653084.1 | 6e-79 | 61.57% | excision repair cross-complementing 1 ercc1 [Aedes aegypti] |
| NCBI nr blastp | gi|157117886 | 1e-77 | 61.57% | excision repair cross-complementing 1 ercc1 [Aedes aegypti] |
| NCBI nr blastx | gi|157117886 | 3e-79 | 60.92% | excision repair cross-complementing 1 ercc1 [Aedes aegypti] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005634 | 5.9e-45 | nucleus | |
| GO:0006281 | 5.9e-45 | DNA repair | ||
| GO:0003684 | 5.9e-45 | damaged DNA binding | ||
| GO:0004519 | 5.9e-45 | endonuclease activity | ||
| KEGG pathway | aag:AaeL_AAEL008081 | 2e-78 | ||
| K10849 (ERCC1) | maps-> | Nucleotide excision repair | ||
| InterPro domain | [43-171] IPR011335 | 3.2e-47 | Restriction endonuclease, type II-like | |
| [43-154] IPR004579 | 5.9e-45 | DNA repair protein rad10 | ||
| [129-247] IPR010994 | 4.2e-16 | RuvA domain 2-like | ||
| Orthology group | MCL11937 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS208909-TA
ATGGAAATAGAAGACGGTTTTGATGATCTTCTAGGTGAAGTAGAAGTTCCAACATCACCAAAGAAGCCTAAAAGTGGTGAAGACGTCGTAGCTGGAACAGCACCAAAGCCAACAGCGACCAAAACACATTGCGTTCTAGTAAATCAAAAGCAGCGCGGAAATCCTTTGTTGAAATTCATTACAAGTGTCCCATGGGAATATGATGAAATAGTTCCAGATTATGAAATAGGCAAGACTATTGGGATTCTGTTTCTTTCATTGCGGTATCATAATTTAAACCCTGACTATATAAATAACAGACTTAAAGAATTAGGCAAGAAGTATGACCTCAGAGTTCTTTTAGTTCAGGTTGATTTGAAAGACCCACATGTTGCCTTGAAGAATCTAACTAGAATATGCCTTCTGACAGATATGACATTAATGTTAGCGTGGAGTCCGGAGGAATCAGCTAAAATAATAGAAAATTATAAGATATATGAAAATAAACCACCTGATAGAATAATGGAGAAAATTGAAAATGATCCACATCAAAAGATAATAAATGCACTGTCATCAATAAAGCCCGTAAATAAGACTGATGCTATGACATTAATAACAAAATTTGGAACATTAGAGAACATCATTAAAGCAACGGAACAGCGATTAGCTGATTGTCCCGGTTTTGGGGTTACTAAAGCTAAAAAGTTGCACAAGGCTCTGCACGAGCCGTTCTTAAAGAGAGGACAAATGAAGCTTCAAAGTAATGATGAGTTTTCAGAAGAAATCTGCTTGGAAGATATTGAGAAAATGGAAAATGAAGGGAAAAAATAA
>DPOGS208909-PA
MEIEDGFDDLLGEVEVPTSPKKPKSGEDVVAGTAPKPTATKTHCVLVNQKQRGNPLLKFITSVPWEYDEIVPDYEIGKTIGILFLSLRYHNLNPDYINNRLKELGKKYDLRVLLVQVDLKDPHVALKNLTRICLLTDMTLMLAWSPEESAKIIENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLITKFGTLENIIKATEQRLADCPGFGVTKAKKLHKALHEPFLKRGQMKLQSNDEFSEEICLEDIEKMENEGKK-