| DPOGS208976 | ||
|---|---|---|
| Transcript | DPOGS208976-TA | 1032 bp |
| Protein | DPOGS208976-PA | 343 aa |
| Genomic position | DPSCF300009 + 1215508-1217047 | |
| RNAseq coverage | 63x (Rank: top 68%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL002643 | 3e-135 | 67.95% | |
| Bombyx | % | |||
| Drosophila | CG1750-PA | 6e-62 | 40.27% | |
| EBI UniRef50 | UniRef50_UPI00021A737A | 4e-63 | 41.25% | UPI00021A737A related cluster n=2 Tax=unknown RepID=UPI00021A737A |
| NCBI RefSeq | XP_002019989.1 | 9e-65 | 41.56% | GL13743 [Drosophila persimilis] |
| NCBI nr blastp | gi|350401883 | 4e-66 | 43.42% | PREDICTED: methionyl-tRNA formyltransferase, mitochondrial-like [Bombus impatiens] |
| NCBI nr blastx | gi|350401883 | 5e-65 | 43.42% | PREDICTED: methionyl-tRNA formyltransferase, mitochondrial-like [Bombus impatiens] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0071951 | 2.9e-70 | conversion of methionyl-tRNA to N-formyl-methionyl-tRNA | |
| GO:0004479 | 2.9e-70 | methionyl-tRNA formyltransferase activity | ||
| GO:0009058 | 8.9e-46 | biosynthetic process | ||
| GO:0016742 | 8.9e-46 | hydroxymethyl-, formyl- and related transferase activity | ||
| GO:0003824 | 4.5e-11 | catalytic activity | ||
| KEGG pathway | cfa:610763 | 8e-66 | ||
| K00604 (MTFMT, fmt) | maps-> | Aminoacyl-tRNA biosynthesis | ||
| One carbon pool by folate | ||||
| InterPro domain | [34-331] IPR015518 | 4.2e-87 | Methionine tRNA Formyltransferase-like | |
| [34-333] IPR005794 | 2.9e-70 | Methionyl-tRNA formyltransferase | ||
| [34-228] IPR002376 | 8.9e-46 | Formyl transferase, N-terminal | ||
| [228-342] IPR011034 | 4.5e-11 | Formyl transferase, C-terminal-like | ||
| [227-329] IPR005793 | 7.8e-11 | Formyl transferase, C-terminal | ||
| Orthology group | MCL14843 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS208976-TA
ATGTCAAATATAATTTGTAACCTCTCAATCTCAATAAATAGATTTCTTTTAAAAGAAAAATATAATTATTTACGTAAAATACACTTACGATCATATTACAACGTGCTTTTCTTTGGATCAGACGTAATTGGCCTAAACTGTTTACAAGAAATCGATAAGATCAGGAAGAATGAAAACCTTATACGTCGATTGGATTTGGTCACAGCAAATAGTAGTAAAAATAAAAATGCTATTGAGAAGTATGCCGAAACCAATAATATGCGAATCTTGCATTGGCCGAACTTGAACATCAACGAAGGTGAATACGACATTGGTTTGATAGTGGCATTCGGTCATTTAATTAAGGCCGATGTACTCAAAAAATTCCCTCTAGGTATGGTGAATGTTCATCCTAGTCTGTTACCCCGCTGGCGTGGTGCTGCACCAATTATTTACACTCTAATGCATGGTGATACCGTAGGAGGTGTATCACTTATGAAAATTAAACCAGACATATTTGATGTTGGTGAAATAATAAGTCAACAAAGAGTTCCAGTATCTGATACTATAAAGTTGCCAGAACTAACAAGACAATTTTCGGATATTGGTGCTAAAATGTTGGTGAACTGCTTGAAGAACTTACCCAGAAGTCTTGAGAATGCTCAGCCTCAGAGCAATGAAGGTGTCACCTATGCCAAGAAGATAAATAAATCGATTAGCCAAGTAAGATGGATGGAAATGAGTGCCAAAGAGGTTTACAACTTGTACCGTGCAATATATGGATTATATCCATTAACAACAATGTTTAAAGATAAGCAAGTGAAGTTGTTTAATGCATTTTTAGTAAATAATGACTTGTATAGTGATAAACCCATCGGAACCCTTGAATATTGTGAATCAACAAAATCTATTAGGATATTGTGTAAAGATAAGAAATTCATAAATTTCAAATCACTTAGAATAGTCGGTAGAAAAGAAATATCAGCTGTAGATTTTTATAATGGTTATATAAAGAATATATCTGTAGATGTAAGATTATGTGTTGCCTGTTAG
>DPOGS208976-PA
MSNIICNLSISINRFLLKEKYNYLRKIHLRSYYNVLFFGSDVIGLNCLQEIDKIRKNENLIRRLDLVTANSSKNKNAIEKYAETNNMRILHWPNLNINEGEYDIGLIVAFGHLIKADVLKKFPLGMVNVHPSLLPRWRGAAPIIYTLMHGDTVGGVSLMKIKPDIFDVGEIISQQRVPVSDTIKLPELTRQFSDIGAKMLVNCLKNLPRSLENAQPQSNEGVTYAKKINKSISQVRWMEMSAKEVYNLYRAIYGLYPLTTMFKDKQVKLFNAFLVNNDLYSDKPIGTLEYCESTKSIRILCKDKKFINFKSLRIVGRKEISAVDFYNGYIKNISVDVRLCVAC-