| DPOGS209008 | ||
|---|---|---|
| Transcript | DPOGS209008-TA | 300 bp |
| Protein | DPOGS209008-PA | 99 aa |
| Genomic position | DPSCF300209 - 81474-81773 | |
| RNAseq coverage | 3675x (Rank: top 3%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL002541 | 5e-36 | 82.35% | |
| Bombyx | BGIBMGA012549-TA | 3e-35 | 81.61% | |
| Drosophila | ATPsyn-beta-PA | 5e-13 | 88.89% | |
| EBI UniRef50 | UniRef50_Q05825 | 1e-10 | 88.89% | ATP synthase subunit beta, mitochondrial n=3850 Tax=root RepID=ATPB_DROME |
| NCBI RefSeq | NP_001040450.1 | 1e-33 | 81.61% | H+ transporting ATP synthase beta subunit isoform 1 [Bombyx mori] |
| NCBI nr blastp | gi|114052072 | 3e-32 | 81.61% | H+ transporting ATP synthase beta subunit isoform 1 [Bombyx mori] |
| NCBI nr blastx | gi|114052072 | 1e-30 | 83.53% | H+ transporting ATP synthase beta subunit isoform 1 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0046034 | 1.7e-07 | ATP metabolic process | |
| GO:0016469 | 1.7e-07 | proton-transporting two-sector ATPase complex | ||
| GO:0015992 | 1.7e-07 | proton transport | ||
| GO:0046961 | 1.7e-07 | proton-transporting ATPase activity, rotational mechanism | ||
| GO:0046933 | 1.7e-07 | hydrogen ion transporting ATP synthase activity, rotational mechanism | ||
| KEGG pathway | tca:661213 | 1e-20 | ||
| K02133 (ATPeF1B, ATP5B) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Parkinson's disease | ||||
| InterPro domain | [39-85] IPR018118 | 1.7e-07 | ATPase, F1/A1 complex, alpha/beta subunit, N-terminal | |
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209008-TA
ATGTTTGGTGCTGTAAGCAGGGTCGGCAGCGGCTTTTTAGCCGCTAAAACAGCAGCTGAAAAAGTACTTTCAGAATGTGGCAAAGTTGCAGCAGTTGCTGGAAACAAGAGGGATTACGCAGCTAAGGCCTCTGGAAAAGGGCAAGGTAAGGTGGTTGCAGTCATTGGTGCTGTTGTGGACGTACAATTCGAAGACAACCTTCCTCCCATTCTAAATGCCCTCGAAGTCCAAGACCGATCTCCCCGCCTGGTATGTCGATCTAGCTTTGAAAAATATTTTAATAAACGTTTTCGGAAGTGA
>DPOGS209008-PA
MFGAVSRVGSGFLAAKTAAEKVLSECGKVAAVAGNKRDYAAKASGKGQGKVVAVIGAVVDVQFEDNLPPILNALEVQDRSPRLVCRSSFEKYFNKRFRK-