| DPOGS209057 | ||
|---|---|---|
| Transcript | DPOGS209057-TA | 378 bp |
| Protein | DPOGS209057-PA | 125 aa |
| Genomic position | DPSCF300102 + 148796-153865 | |
| RNAseq coverage | 0x (Rank: top 97%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL004647 | 2e-10 | 39.78% | |
| Bombyx | BGIBMGA010051-TA | 1e-24 | 92.86% | |
| Drosophila | HGTX-PB | 2e-24 | 92.45% | |
| EBI UniRef50 | UniRef50_B0W3J1 | 6e-24 | 91.53% | Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W3J1_CULQU |
| NCBI RefSeq | XP_001843275.1 | 8e-25 | 91.53% | conserved hypothetical protein [Culex quinquefasciatus] |
| NCBI nr blastp | gi|170030799 | 2e-23 | 91.53% | conserved hypothetical protein [Culex quinquefasciatus] |
| NCBI nr blastx | gi|170030799 | 1e-23 | 68.09% | conserved hypothetical protein [Culex quinquefasciatus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003677 | 7.1e-13 | DNA binding | |
| GO:0006355 | 7.1e-13 | regulation of transcription, DNA-dependent | ||
| GO:0043565 | 1e-10 | sequence-specific DNA binding | ||
| GO:0003700 | 1e-10 | sequence-specific DNA binding transcription factor activity | ||
| GO:0005515 | 3.3e-10 | protein binding | ||
| KEGG pathway | xla:100101340 | 2e-23 | ||
| K08030 (NKX6-1) | maps-> | Maturity onset diabetes of the young | ||
| InterPro domain | [20-87] IPR012287 | 7.1e-13 | Homeodomain-related | |
| [43-87] IPR001356 | 1e-10 | Homeobox | ||
| [33-87] IPR009057 | 3.3e-10 | Homeodomain-like | ||
| Orthology group | MCL16430 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209057-TA
ATGCCTGAGAATGACGCTGCCTCTAAACATCGAATCGAATACTTTCAAGGTAGTAAGCAGAAGAGAGTGAGCAACGGCGCGCTGTCGGCGTGCGGCGGCCAGGGTCTGGACAAGGAAGGCAAGAAGAAACACACGAGGCCCACCTTCAGCGGACAACAGATCTTCGCCCTGGAGAAGACCTTCGAGCAGACCAAATACCTCGCGGGGCCCGAGAGGGCTAAGCTGGCGTACGCCCTGGGCATGACCGAGTCGCAGGTTAAGCTACTAGAGGCAGAGGGTAACTACACCTACACCGGCTCTCGTAAACTGCGCCAAATAGCTCACATGCCATATGTGAAACCCATTCACGCTATAATGTTTCTAGATGTGTGTATATAA
>DPOGS209057-PA
MPENDAASKHRIEYFQGSKQKRVSNGALSACGGQGLDKEGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKLLEAEGNYTYTGSRKLRQIAHMPYVKPIHAIMFLDVCI-