Monarch geneset OGS2.0

DPOGS209150
TranscriptDPOGS209150-TA534 bp
ProteinDPOGS209150-PA177 aa
Genomic positionDPSCF300061 - 571564-573535
RNAseq coverage29540x (Rank: top 0%)
Annotation
HeliconiusHMEL0100285e-6288.52% 
BombyxBGIBMGA011467-TA2e-9794.35% 
DrosophilaRpL18A-PA2e-7675.00% 
EBI UniRef50UniRef50_P410932e-7475.00%60S ribosomal protein L18a n=57 Tax=Bilateria RepID=RL18A_DROME
NCBI RefSeqNP_001037219.12e-9593.79%ribosomal protein L18A [Bombyx mori]
NCBI nr blastpgi|3423564672e-9595.48%ribosomal protein L18A [Heliconius melpomene cythera]
NCBI nr blastxgi|3423564672e-9595.48%ribosomal protein L18A [Heliconius melpomene cythera]
Group
Gene OntologyGO:00058408e-103ribosome
GO:00064128e-103translation
GO:00037358e-103structural constituent of ribosome
KEGG pathwayame:4098321e-81 
 K02882 (RP-L18Ae, RPL18A)maps-> Ribosome
InterPro domain[2-176] IPR0211388e-103Ribosomal protein L18a
[7-130] IPR0235732.9e-54Ribosomal protein L18a/LX
Orthology groupMCL12205 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS209150-TA
ATGAAGGCGAAAGGAGAGTTGAAGGAATATGAAGTCATTGGGCGCAAGCTGCCCTCGGAGAGCGATCCCAAGCCTCCTCTATATAAAATGAGAATCTTCTCTCCAGACCCCATAGTGGCTAAGTCACGGTTTTGGTACTTTTTAAGACAATTGAAGAAGTTTAAGAAGACTACCGGCGAAATTGTATCGATCAGGGAAATCCCGGAGAGGAGTCCAATCAAGATAAAGAACTTTGGCATTTGGTTGCGCTATGAGTCTCGCTCGGGTGTCCACAACATGTACCGCGAGTATCGTGCTCTCAGTGTGGGAGACGGCGTCACACAGTGCTACAGGGACATGGGCGCTAGACACAGGGCGCGCGCTCATTCCATACAGATAATCAAAGTGGAGGTGATCAAGGCCGCTGCCTGCCGCCGTCCCCAGGTGAAACAGTTCCACAACAGCAGCATCCGTTTCCCGCTGCCCAAGCGCGTGCATCACTACAAGAGACTCAACACCTTCGCATACAAGCGACCCAGCACATACTTCTTGTAA

Protein sequence:

>DPOGS209150-PA
MKAKGELKEYEVIGRKLPSESDPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIREIPERSPIKIKNFGIWLRYESRSGVHNMYREYRALSVGDGVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSSIRFPLPKRVHHYKRLNTFAYKRPSTYFL-