DPOGS209163 | ||
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Transcript | DPOGS209163-TA | 831 bp |
Protein | DPOGS209163-PA | 276 aa |
Genomic position | DPSCF300061 - 126510-129653 | |
RNAseq coverage | 89x (Rank: top 63%) |
Annotation | ||||
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Heliconius | HMEL009747 | 2e-105 | 69.37% |   |
Bombyx | BGIBMGA011480-TA | 3e-85 | 63.60% |   |
Drosophila | CG13690-PA | 1e-94 | 63.50% |   |
EBI UniRef50 | UniRef50_Q9VPP5 | 1e-92 | 63.50% | Ribonuclease H2 subunit A n=41 Tax=Coelomata RepID=RNH2A_DROME |
NCBI RefSeq | XP_001965374.1 | 3e-94 | 63.87% | GF24795 [Drosophila ananassae] |
NCBI nr blastp | gi|194766523 | 5e-93 | 63.87% | GF24795 [Drosophila ananassae] |
NCBI nr blastx | gi|223967509 | 6e-90 | 63.87% | CG13690-PA [Drosophila melanogaster] |
Group | ||||
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Gene Ontology | GO:0003723 | 7.8e-116 | RNA binding | |
GO:0004523 | 7.8e-116 | ribonuclease H activity | ||
GO:0003676 | 1.3e-52 | nucleic acid binding | ||
GO:0016070 | 1.8e-51 | RNA metabolic process | ||
KEGG pathway | dan:Dana_GF24795 | 8e-94 |   | |
  | K10743 (RNASEH2A) | maps-> | DNA replication | |
InterPro domain | [1-274] IPR001352 | 7.8e-116 | Ribonuclease HII/HIII | |
[1-226] IPR012337 | 1.3e-52 | Ribonuclease H-like | ||
[2-217] IPR004649 | 1.8e-51 | Ribonuclease H2, subunit A | ||
[179-222] IPR023160 | 8.6e-17 | Ribonuclease HII, helix-loop-helix cap domain | ||
Orthology group | MCL11203 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS209163-TA
ATGCTTGGTGTTGACGAAGCTGGACGTGGGCCTGTTTTGGGTCCAATGGTATACGGAATTGCATATTGTCCAATAAATCAAAACAAAGTATTAGAATCGCTCGGCTGTGCGGACTCAAAAGCTCTTACAGAAGAAAAGAGAGACGAGATTTTTCTTAAAATGTTAACCGAGAAAGAAGCTGTTGATAATGTTGGCTGGATGGCTGAAGTTATATCACCAAATTATATTTCTAACTCTATGTATAAAAGAGCCAAACATTCTCTCAACGAGGTATCAATGAATTCCGCGATATCTTTGATAAAAAAAACTATTGAATTAGGTGGGAATATAACAGAGGTGTATGTGGATACTGTCGGCCCTCCGGAGAAATATCAGGCCAGGTTAAAAGAAATCTTCCCTGATATTAAGATCACCGTGGCAAAGAAAGCTGATTCCATTTACCCAATAGTGTCGGCGGCCAGTATAGTGGCTAAGGTCACAAGAGACCACGCCCTCAAGGTTTGGGAATTTCCCGAAGGTCTTGAGATCAATCACAAGGACTTTGGGAGTGGTTACCCAGGAGATCCATTGACTAAGAAGTTTATAAGGGAACAGATTGACAGAATATTCGGCTACCCCCTGTTGGTAAGGTTTAGTTGGTCCACGGCCGAACTGGCTCTCCAGGAGAGAGCAGCGAAGTGCAGCTTCGAGGACATAGACGACGAGAATACGAAGAAACCGAAAGGAACCCAGGCCATCAGCTCGTTCTTTTCACCGAAGAACGAGCGGAAACGGAAGAGGCATAAATTTTTCGAAGAAAGAAATTTGACAATGAGCAATGCTTTCGAATAA
>DPOGS209163-PA
MLGVDEAGRGPVLGPMVYGIAYCPINQNKVLESLGCADSKALTEEKRDEIFLKMLTEKEAVDNVGWMAEVISPNYISNSMYKRAKHSLNEVSMNSAISLIKKTIELGGNITEVYVDTVGPPEKYQARLKEIFPDIKITVAKKADSIYPIVSAASIVAKVTRDHALKVWEFPEGLEINHKDFGSGYPGDPLTKKFIREQIDRIFGYPLLVRFSWSTAELALQERAAKCSFEDIDDENTKKPKGTQAISSFFSPKNERKRKRHKFFEERNLTMSNAFE-