DPOGS209302 | ||
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Transcript | DPOGS209302-TA | 873 bp |
Protein | DPOGS209302-PA | 290 aa |
Genomic position | DPSCF300234 - 467208-483094 | |
RNAseq coverage | 15x (Rank: top 82%) |
Annotation | ||||
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Heliconius | HMEL004236 | 2e-109 | 74.72% |   |
Bombyx | BGIBMGA013755-TA | 3e-140 | 91.29% |   |
Drosophila | dpr-PA | 2e-89 | 60.98% |   |
EBI UniRef50 | UniRef50_G6DPQ5 | 8e-155 | 100.00% | Putative defective proboscis extension response n=9 Tax=Endopterygota RepID=G6DPQ5_DANPL |
NCBI RefSeq | XP_973268.2 | 8e-102 | 69.39% | PREDICTED: similar to defective proboscis extension response, putative [Tribolium castaneum] |
NCBI nr blastp | gi|189239393 | 1e-100 | 69.39% | PREDICTED: similar to defective proboscis extension response, putative [Tribolium castaneum] |
NCBI nr blastx | gi|189239393 | 5e-97 | 69.39% | PREDICTED: similar to defective proboscis extension response, putative [Tribolium castaneum] |
Group | ||||
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KEGG pathway | mdo:100028028 | 1e-08 |   | |
  | K06550 (L1CAM) | maps-> | Axon guidance | |
  |   |   | Cell adhesion molecules (CAMs) | |
InterPro domain | [121-245] IPR013783 | 4.9e-16 | Immunoglobulin-like fold | |
[150-245] IPR003599 | 1.1e-10 | Immunoglobulin subtype | ||
[46-129] IPR013098 | 2.6e-10 | Immunoglobulin I-set | ||
[150-232] IPR013106 | 1.8e-08 | Immunoglobulin V-set | ||
Orthology group | MCL16401 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS209302-TA
ATGTTCAACCTAAACGCAGACCTGTACCCACATTACAGTTCAGATGTCAGAGAGATAATTAGGAGCTTGTTTGTTACAGGGTCAGCGCATTATGGTGAGGACAGCGTGGGCTCGTTTCCATACTTCGAGTATAATGTGCCGCGAAATGTTACCACCGTTGTCGGTCAGACCGCCTTCCTGCATTGTAGGGTTGAACAACTCGGCGATAAAGCGGTGTCATGGATAAGAAAAAGGGATCTTCACATTTTAACAGCTGGAATTTTGACATACACATCAGATCAGAGGTTCCAGGTCATAAGGCCAGATAAGTCTGAGAACTGGACTCTTCAAATCAAATTTCCTCAGGAAAGAGACGCTGGCATCTACGAATGCCAAGTAAATACGGAACCGAAGATGTCTCTGGCATTTCAATTAAATGTTGTCGAGGCCAAAGCAAAAGTTTTGGGTCCAGCAGACTTATACGTCAAGACGGGCAGTTTGTTGTCATTAACTTGTATCTTGAGTCAAGGACCGCACGATTTAGGCACCATATTTTGGTATAAGGGATCAAAATTAATAGAATACAAAGAATTAGAAGCAAATGAAGTGGAAGAGCAAAGGATTAGGCTCAAAACGGAATGGACAGAACAACTGTCGTCACGGTTAACTATCGACAAGTTACAACCGACGGACAGCGGAAATTACAGCTGCGTTCCCACAATGGCTGAAACTGCCTCCGTCAATGTACACGTTATAAACGGTGAACATCCAGCTGCGATGCAACACGGAAACACAAACACAGCATCTCCTTGTGCGCTGTCGGTTAATCTTCTCATCTCACTGTATTGTTCCCTCGCTACCTTATACACAAGCACCGTTGACGGACTTAGATGA
>DPOGS209302-PA
MFNLNADLYPHYSSDVREIIRSLFVTGSAHYGEDSVGSFPYFEYNVPRNVTTVVGQTAFLHCRVEQLGDKAVSWIRKRDLHILTAGILTYTSDQRFQVIRPDKSENWTLQIKFPQERDAGIYECQVNTEPKMSLAFQLNVVEAKAKVLGPADLYVKTGSLLSLTCILSQGPHDLGTIFWYKGSKLIEYKELEANEVEEQRIRLKTEWTEQLSSRLTIDKLQPTDSGNYSCVPTMAETASVNVHVINGEHPAAMQHGNTNTASPCALSVNLLISLYCSLATLYTSTVDGLR-