| DPOGS209329 | ||
|---|---|---|
| Transcript | DPOGS209329-TA | 465 bp |
| Protein | DPOGS209329-PA | 154 aa |
| Genomic position | DPSCF300234 + 204565-206377 | |
| RNAseq coverage | 809x (Rank: top 16%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL005879 | 6e-49 | 75.91% | |
| Bombyx | BGIBMGA013884-TA | 2e-44 | 85.23% | |
| Drosophila | mRpL54-PA | 2e-25 | 63.53% | |
| EBI UniRef50 | UniRef50_Q1HQ49 | 5e-41 | 85.23% | Mitochondrial ribosomal protein L54 n=7 Tax=Endopterygota RepID=Q1HQ49_BOMMO |
| NCBI RefSeq | NP_001098690.1 | 1e-41 | 85.23% | mitochondrial ribosomal protein L54 [Bombyx mori] |
| NCBI nr blastp | gi|157412298 | 2e-40 | 85.23% | mitochondrial ribosomal protein L54 [Bombyx mori] |
| NCBI nr blastx | gi|157412298 | 1e-53 | 77.86% | mitochondrial ribosomal protein L54 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | ||||
| InterPro domain | [77-151] IPR013870 | 6.5e-17 | Ribosomal protein L37, mitochondrial | |
| Orthology group | MCL16027 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209329-TA
ATGTCTATCATATGCAATTTTTCCCAGATATATACATGTTTACGGCATCAAATGTTTCAATCGCATGCCTCTAGAGTTATATACTCAGTGAACAAAGCTAAGTTTCATACTTATAAAACAAACTATGCGGTAAAAAAAACAACTAGTGCTGCTGGAGGTGTTCTAGGGTTGGGTAAAGGCAAGAAAAAGGCTGGCAAGCTAAGTACTATGGAAAAGAAGGAGTTGCCAGTGGAAACAGATCCAGAAAAATTAGTCAATTATGTTTGCGGATCCAATATATATGTTACCGGGGAAGATGTACAGATTAAACCGGACAGTGAATATCCTGAATGGCTGTGGAGTTTGAACACTGGTAAAGCACCTCGCATTGAAGATTTAGATCCAAACACAAAGCAGTATTGGTTAAGAGTGCGTACAGAGGGTATGAGACGAAACAATCGTCTACGATCTATGAGAAAGTTCTAG
>DPOGS209329-PA
MSIICNFSQIYTCLRHQMFQSHASRVIYSVNKAKFHTYKTNYAVKKTTSAAGGVLGLGKGKKKAGKLSTMEKKELPVETDPEKLVNYVCGSNIYVTGEDVQIKPDSEYPEWLWSLNTGKAPRIEDLDPNTKQYWLRVRTEGMRRNNRLRSMRKF-