DPOGS209352 | ||
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Transcript | DPOGS209352-TA | 213 bp |
Protein | DPOGS209352-PA | 70 aa |
Genomic position | DPSCF300118 - 481348-482444 | |
RNAseq coverage | 73788x (Rank: top 0%) |
Annotation | ||||
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Heliconius | % |   | ||
Bombyx | BGIBMGA005684-TA | 2e-30 | 98.44% |   |
Drosophila | RpL38-PA | 2e-28 | 81.43% |   |
EBI UniRef50 | UniRef50_Q56FC8 | 2e-29 | 94.29% | 60S ribosomal protein L38 n=14 Tax=Eukaryota RepID=RL38_LYSTE |
NCBI RefSeq | NP_001037554.1 | 6e-32 | 98.57% | 60S ribosomal protein L38 [Bombyx mori] |
NCBI nr blastp | gi|74910327 | 8e-31 | 100.00% | Ribosomal protein L38 [Plutella xylostella] |
NCBI nr blastx | gi|74910327 | 1e-31 | 100.00% | Ribosomal protein L38 [Plutella xylostella] |
Group | ||||
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Gene Ontology | GO:0005840 | 4.7e-57 | ribosome | |
GO:0006412 | 4.7e-57 | translation | ||
GO:0005622 | 4.7e-57 | intracellular | ||
GO:0003735 | 4.7e-57 | structural constituent of ribosome | ||
KEGG pathway | nvi:100118041 | 1e-30 |   | |
  | K02923 (RP-L38e, RPL38) | maps-> | Ribosome | |
InterPro domain | [1-70] IPR002675 | 4.7e-57 | Ribosomal protein L38e | |
Orthology group | MCL15805 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS209352-TA
ATGCCCCGCGAAATTAAAGATATCAAGGACTTCCTCCTAAAGGCGCGCAGGAAAGATGCTAAATCTGTGAAGATAAAGAAGAATCCCGAGAACGTGAAGTTCAAGGTCCGTTGCTCGCGGTTCCTATACACGCTCGTCATCACCGACAAGGAGAAGGCGGAGAAACTCAAACAAAGTCTGCCCCCAGGTCTCCAAGTCAAAGAAGTTAAGTGA
>DPOGS209352-PA
MPREIKDIKDFLLKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEVK-