| DPOGS209388 | ||
|---|---|---|
| Transcript | DPOGS209388-TA | 402 bp |
| Protein | DPOGS209388-PA | 133 aa |
| Genomic position | DPSCF300118 + 287413-288404 | |
| RNAseq coverage | 30x (Rank: top 76%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL013107 | 4e-57 | 87.83% | |
| Bombyx | BGIBMGA005530-TA | 3e-44 | 86.81% | |
| Drosophila | mRpS33-PA | 7e-35 | 69.07% | |
| EBI UniRef50 | UniRef50_Q9VEV5 | 1e-32 | 69.07% | Mitochondrial ribosomal protein S33 n=39 Tax=Coelomata RepID=Q9VEV5_DROME |
| NCBI RefSeq | XP_001949175.1 | 5e-36 | 68.63% | PREDICTED: similar to mitochondrial ribosomal protein S33 CG10406-PA isoform 2 [Acyrthosiphon pisum] |
| NCBI nr blastp | gi|87248359 | 2e-47 | 78.57% | ribosomal protein S33 [Bombyx mori] |
| NCBI nr blastx | gi|87248359 | 8e-46 | 77.88% | ribosomal protein S33 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | ||||
| InterPro domain | [31-119] IPR013219 | 5.7e-28 | Ribosomal protein S27/S33, mitochondrial | |
| Orthology group | MCL13554 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209388-TA
ATGACTAAAAGCCATCCCCAGAAAGCAGACCTGACTATTACGATGGCAACTAAATTCGTGAAATATTCACAATTAATAAACAATCAAACCAAATACGCCGAGAGGATGAAGCGTTTGTCTAATAGAATTTTCGGTGAAGTAGCGATACCAACCAACGCAAAGTCAATGAAAGTCGTAAAAATATTTTCCGAACGACCGCTTCACACCAACGAGAACATCTTACATTACTATCCCCGGCACGTGGAGACACACGCGTTGATGTTGAAACTGAGAGAATACGGATTGTTTAGAGATGAACACCAGGACTTCAAGGAGGAAATGAAACGGCTCAGGGAGCTGAGAGGAAAGGTCAAAGTGTGGAAGAGGCTTCTTAATAAGGAACAGAAAGAGGCGGATACATAG
>DPOGS209388-PA
MTKSHPQKADLTITMATKFVKYSQLINNQTKYAERMKRLSNRIFGEVAIPTNAKSMKVVKIFSERPLHTNENILHYYPRHVETHALMLKLREYGLFRDEHQDFKEEMKRLRELRGKVKVWKRLLNKEQKEADT-