DPOGS209447 | ||
---|---|---|
Transcript | DPOGS209447-TA | 654 bp |
Protein | DPOGS209447-PA | 217 aa |
Genomic position | DPSCF300275 - 150341-151367 | |
RNAseq coverage | 765x (Rank: top 17%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL005330 | 2e-117 | 93.09% |   |
Bombyx | BGIBMGA005864-TA | 3e-117 | 91.24% |   |
Drosophila | Trs23-PA | 5e-87 | 67.28% |   |
EBI UniRef50 | UniRef50_Q9VLI9 | 6e-85 | 67.28% | RH40237p n=30 Tax=Eumetazoa RepID=Q9VLI9_DROME |
NCBI RefSeq | XP_974526.1 | 7e-97 | 75.58% | PREDICTED: similar to AGAP008106-PA [Tribolium castaneum] |
NCBI nr blastp | gi|309951474 | 3e-112 | 89.86% | trafficking protein particle complex subunit 4 [Antheraea yamamai] |
NCBI nr blastx | gi|309951474 | 1e-108 | 89.86% | trafficking protein particle complex subunit 4 [Antheraea yamamai] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0006888 | 6.8e-76 | ER to Golgi vesicle-mediated transport | |
GO:0005801 | 6.8e-76 | cis-Golgi network | ||
GO:0006810 | 2.7e-32 | transport | ||
KEGG pathway |   | |||
InterPro domain | [2-217] IPR007233 | 6.8e-76 | Sybindin-like protein | |
[1-209] IPR011012 | 2.7e-32 | Longin-like | ||
Orthology group | MCL13584 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS209447-TA
ATGGTTATTTACGGAGTTTATATTGTAAGCAAATCCGGTGGACTGATATACAACTATGATCACAACATTCCGAAAGTAGAAACTGAAAAAACATTTGGATACCCATTGGACATTAAATTAGAATACGAAAATAAGAAAGTTGTTGTTGTTTTCGGTCAGAGAGACGGCATTAATGTTAGTCATGTGTTGCTGACTGTTAATGGATCTCCAGTGACTGGCCGGACCACGGAAGACGGTAGAGATGTTTTTGAAGTTATAGAACAAAAAGAAAACTATCCCCTTAGTCTTAAATTTGGACGACCCAGAGCTACGACGAACGAGAAGATCGTGCTGGCCAGTATGTTCTATCCACTGTTTGCTCTGGCCAGTCAGCTGAGTCCTGTTCCTAAGTCTTCAGGAATTGAGACTCTGACAGCTGACACATTCAAACTGTCCTGTTTTCAAACACTAACAGGAGTGAAGTTCATTGTGGTCACGGATCCTAACATGCAGGGTGCGGACATAGTTCTTAAGAGAATTTATGAGCTGTACTCAGACTATGCTCTCAAGAACCCCTTCTACTCCCTGGAGATGCCTATCCGGTGTGAATTGTTTGACACCTCTCTTCATACTTTGTTGGAACTGGTGGAGAAATCTGGAACATCTAATTTATAA
>DPOGS209447-PA
MVIYGVYIVSKSGGLIYNYDHNIPKVETEKTFGYPLDIKLEYENKKVVVVFGQRDGINVSHVLLTVNGSPVTGRTTEDGRDVFEVIEQKENYPLSLKFGRPRATTNEKIVLASMFYPLFALASQLSPVPKSSGIETLTADTFKLSCFQTLTGVKFIVVTDPNMQGADIVLKRIYELYSDYALKNPFYSLEMPIRCELFDTSLHTLLELVEKSGTSNL-