DPOGS209452 | ||
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Transcript | DPOGS209452-TA | 588 bp |
Protein | DPOGS209452-PA | 195 aa |
Genomic position | DPSCF300275 - 86072-87034 | |
RNAseq coverage | 83x (Rank: top 64%) |
Annotation | ||||
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Heliconius | HMEL013380 | 2e-100 | 85.05% |   |
Bombyx | BGIBMGA005869-TA | 1e-54 | 80.87% |   |
Drosophila | Psf1-PA | 2e-58 | 51.78% |   |
EBI UniRef50 | UniRef50_Q9W0I7 | 2e-56 | 51.78% | IP07275p n=26 Tax=Metazoa RepID=Q9W0I7_DROME |
NCBI RefSeq | XP_002731436.1 | 5e-61 | 55.84% | PREDICTED: hypothetical protein [Saccoglossus kowalevskii] |
NCBI nr blastp | gi|260836387 | 5e-61 | 54.82% | hypothetical protein BRAFLDRAFT_120278 [Branchiostoma floridae] |
NCBI nr blastx | gi|260836387 | 7e-59 | 54.82% | hypothetical protein BRAFLDRAFT_120278 [Branchiostoma floridae] |
Group | ||||
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KEGG pathway |   | |||
InterPro domain | [1-196] IPR005339 | 5.5e-77 | GINS complex, subunit Psf1 | |
[22-103] IPR021151 | 4.2e-07 | GINS complex | ||
Orthology group | MCL13585 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS209452-TA
ATGTTTGGAGAAAAAGTAATAGAATTAATTAAAGAAGCAGAAAGAAATCGCGGAACGCTCGATCAATTTAATGATGAGACGATCCGTCAAATTATAGAGGAGATGCATGTACTGTTTAAACTAAATATGAATGACGCGAATTCAACAACTGAAAACAAATCTCTATGGACGACGGTCCAAGTTCGGCATTCAGCTTTAGAAAGGAACAAGAGATGTCTCTTAGCTTACCTCTACAACAGAATGAACAAAATAAAGACTCTCAGATGGGAATTTGGTTCCGTCCTACCTCCAGATGTGAGGGAGCTTTTGTCTGATGGAGAATATGACTGGTTCTCCAAATACTCAACAAACCTTGCTACCTACATGCGTTCTCTTGGCGAGGACATCGGTTATAATGGTATAGACCTCACAGAAAACCTCCGACCACCAAAGTCACTGTACATTGAAGTGCTTTGTGTGACGGACCATGGTAAATTTGAACTAGAAGATGGTGATGTGATTATGTTAAAAAAGAATACAAGACATTTTTTACCAGCTTCGGAATGTCAGACTCTTATAAGGAAGGGAATTTTACAACAAATTGTTTGA
>DPOGS209452-PA
MFGEKVIELIKEAERNRGTLDQFNDETIRQIIEEMHVLFKLNMNDANSTTENKSLWTTVQVRHSALERNKRCLLAYLYNRMNKIKTLRWEFGSVLPPDVRELLSDGEYDWFSKYSTNLATYMRSLGEDIGYNGIDLTENLRPPKSLYIEVLCVTDHGKFELEDGDVIMLKKNTRHFLPASECQTLIRKGILQQIV-