| DPOGS209495 | ||
|---|---|---|
| Transcript | DPOGS209495-TA | 696 bp |
| Protein | DPOGS209495-PA | 231 aa |
| Genomic position | DPSCF300127 - 213361-225066 | |
| RNAseq coverage | 529x (Rank: top 24%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016025 | 8e-93 | 77.92% | |
| Bombyx | BGIBMGA001966-TA | 1e-36 | 37.98% | |
| Drosophila | Rho1-PB | 1e-37 | 40.11% | |
| EBI UniRef50 | UniRef50_C3YW53 | 3e-51 | 46.36% | Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YW53_BRAFL |
| NCBI RefSeq | XP_002433404.1 | 1e-46 | 49.21% | GTPase Rho, putative [Ixodes scapularis] |
| NCBI nr blastp | gi|260809403 | 1e-50 | 46.36% | hypothetical protein BRAFLDRAFT_223842 [Branchiostoma floridae] |
| NCBI nr blastx | gi|260809403 | 2e-49 | 45.53% | hypothetical protein BRAFLDRAFT_223842 [Branchiostoma floridae] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0007264 | 1.3e-57 | small GTPase mediated signal transduction | |
| GO:0005622 | 1.3e-57 | intracellular | ||
| GO:0005525 | 1.3e-57 | GTP binding | ||
| GO:0015031 | 3.7e-13 | protein transport | ||
| GO:0016020 | 5e-10 | membrane | ||
| GO:0007165 | 5e-10 | signal transduction | ||
| GO:0006184 | 5e-10 | GTP catabolic process | ||
| GO:0003924 | 5e-10 | GTPase activity | ||
| KEGG pathway | ||||
| InterPro domain | [22-196] IPR003578 | 1.3e-57 | Small GTPase superfamily, Rho type | |
| [21-190] IPR001806 | 5.5e-40 | Small GTPase superfamily | ||
| [18-172] IPR005225 | 1.4e-22 | Small GTP-binding protein domain | ||
| [20-196] IPR003579 | 3.7e-13 | Small GTPase superfamily, Rab type | ||
| [17-196] IPR020849 | 5e-10 | Small GTPase superfamily, Ras type | ||
| Orthology group | MCL34805 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209495-TA
ATGTGGTCAGGCAAGAAGTGTTCAGAGGGGGGCGCTGGTACACCCACTGAAGAGGAGGTTAAAGTAGTACTTGTGGGTGACACTCAGTGCGGCAAAACATCACTCGTTCAGAGATTTGTGTCTGACACTTTTGTTGAGGCTTACGCTCCAACTGGCTTTGAGAAATATGGGTACACGTGCACTGTGGCCGATTATAAAGTCAACTTCTCTGTTTGGGACACCTCGGGAACAACAGCATACGACACCGTCAGGCCCCTGGCGTATCAGGATGCGAAAATATTTATGATCTGTTTCAACATAGCTGAACCAGAGACCTTAAATAATTCAGCCGCAAAGTGGTATAGAGAAGTACGGACTCATGGAGGTTCAGCTCCAGTTTTACTTTGTGGATGTAAGGCGGATCTCAGACACGACAAAGAAACCCTCACTATGTTGTCCAAGCTCAGAACTCACCCAGTCACCAGTGAAGAGGCTCTATCAGTAGCGAGACAGCTTGGTGCGACGACATATGTAGAGACGTCAGCTAGAGCATCTAGCAAGGGAGTGAAAGATGCCTTCGAGGTAGCAGCTTTAGCAGCTCTCGGGAAACTTAACAAACAACAAATAAAGCAACAGAAGCAAGTGGGACGTAGTAAGAGCAAACGCGATCTGAAAGCTGAGCTGAAGGGAAGAGCGAAAAGTTGTTGCGTCATGTGA
>DPOGS209495-PA
MWSGKKCSEGGAGTPTEEEVKVVLVGDTQCGKTSLVQRFVSDTFVEAYAPTGFEKYGYTCTVADYKVNFSVWDTSGTTAYDTVRPLAYQDAKIFMICFNIAEPETLNNSAAKWYREVRTHGGSAPVLLCGCKADLRHDKETLTMLSKLRTHPVTSEEALSVARQLGATTYVETSARASSKGVKDAFEVAALAALGKLNKQQIKQQKQVGRSKSKRDLKAELKGRAKSCCVM-