| DPOGS209544 | ||
|---|---|---|
| Transcript | DPOGS209544-TA | 561 bp |
| Protein | DPOGS209544-PA | 186 aa |
| Genomic position | DPSCF300092 - 222864-224944 | |
| RNAseq coverage | 18271x (Rank: top 1%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016528 | 5e-90 | 90.91% | |
| Bombyx | BGIBMGA012414-TA | 8e-98 | 95.19% | |
| Drosophila | RpL17-PB | 6e-82 | 82.26% | |
| EBI UniRef50 | UniRef50_Q9W3W8 | 6e-80 | 82.26% | 60S ribosomal protein L17 n=172 Tax=root RepID=RL17_DROME |
| NCBI RefSeq | NP_001037165.1 | 2e-96 | 95.19% | 60S ribosomal protein L17 [Bombyx mori] |
| NCBI nr blastp | gi|112984422 | 4e-95 | 95.19% | 60S ribosomal protein L17 [Bombyx mori] |
| NCBI nr blastx | gi|342356333 | 1e-99 | 96.26% | ribosomal protein L17 [Heliconius melpomene cythera] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0015934 | 6.8e-147 | large ribosomal subunit | |
| GO:0006412 | 6.8e-147 | translation | ||
| GO:0003735 | 6.8e-147 | structural constituent of ribosome | ||
| GO:0005840 | 2.2e-70 | ribosome | ||
| GO:0005622 | 2.2e-70 | intracellular | ||
| KEGG pathway | phu:Phum_PHUM245140 | 3e-83 | ||
| K02880 (RP-L17e, RPL17) | maps-> | Ribosome | ||
| InterPro domain | [1-186] IPR005721 | 6.8e-147 | Ribosomal protein L22/L17, eukaryotic/archaeal | |
| [2-155] IPR001063 | 2.2e-70 | Ribosomal protein L22/L17 | ||
| Orthology group | MCL14117 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209544-TA
ATGGGTCGTTATTCTCGTGAGCCTGATAATCCCGCCAAATCATGCAAGGCGCGTGGCTCGAACCTTCGTGTTCACTTCAAGAACACATACGAAACAGCCATGGCAATTAAGAAGCTGCCGCTTCGTCGTGCTGTACGTTACTTAAAAAATGTAGTAGACAAAAAAGAATGCATACCATTCCGTCGCTTTAACGGCGGTGTCGGTCGTTGCGCGCAAGCAAAGCAGTTCGGCACAACACAAGGTCGCTGGCCGAAGAAATCCGCCGAGTTCCTACTCCAGCTCTTGAGGAACGCTGAATCTAATGCTGACGTGAAAGGATTGGACGCCGACAGGCTCGTCATTGATCACATACAGGTGAACCGCGCCCCTTGCCTGCGCCGTCGTACATACCGTGCCCACGGTCGTATCAATCCTTATATGTCATCTCCCTGTCACATTGAAGTGTGTCTCAGTGAGAGGGAAGACGCTGTAGCGAGAGCCGCTCCCACAGACGACGCGCCCAAGAAGAAACTGTCCAAGAAGAAGCTGGCCCGCCAGAAGGAGAAGATGATGAGGGAATAA
>DPOGS209544-PA
MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIKKLPLRRAVRYLKNVVDKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADVKGLDADRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVARAAPTDDAPKKKLSKKKLARQKEKMMRE-