DPOGS209577 | ||
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Transcript | DPOGS209577-TA | 324 bp |
Protein | DPOGS209577-PA | 107 aa |
Genomic position | DPSCF300015 - 1033916-1034414 | |
RNAseq coverage | 330x (Rank: top 35%) |
Annotation | ||||
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Heliconius | HMEL017040 | 1e-34 | 85.71% |   |
Bombyx | BGIBMGA006638-TA | 9e-20 | 84.31% |   |
Drosophila | Rcp-PB | 2e-14 | 37.62% |   |
EBI UniRef50 | UniRef50_Q2F5S9 | 1e-42 | 83.02% | Calcitonin gene-related peptide-receptor component protein n=3 Tax=Neoptera RepID=Q2F5S9_BOMMO |
NCBI RefSeq | NP_001040237.1 | 1e-43 | 83.02% | calcitonin gene-related peptide-receptor component protein [Bombyx mori] |
NCBI nr blastp | gi|114052344 | 4e-42 | 83.02% | calcitonin gene-related peptide-receptor component protein [Bombyx mori] |
NCBI nr blastx | gi|114052344 | 6e-41 | 83.02% | calcitonin gene-related peptide-receptor component protein [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0000166 | 9.2e-22 | nucleotide binding | |
GO:0044237 | 9.2e-22 | cellular metabolic process | ||
GO:0003824 | 9.2e-22 | catalytic activity | ||
GO:0003899 | 6.6e-20 | DNA-directed RNA polymerase activity | ||
GO:0006351 | 6.6e-20 | transcription, DNA-dependent | ||
KEGG pathway |   | |||
InterPro domain | [1-107] IPR010997 | 9.2e-22 | HRDC-like | |
[2-102] IPR005574 | 6.6e-20 | RNA polymerase II, Rpb4 | ||
[1-106] IPR006590 | 1.5e-10 | RNA polymerase II, Rpb4, core | ||
Orthology group | MCL15832 |   | Patchy |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS209577-TA
ATGCAGATATTGCAGAAACTGAAAGACAATACTCAGAGAAAACATAAGCGAGAAGCTTCCTTGGCCACAGTCACATATGAGACTGTACATTACCTGCAAAATACAGAATGCAAAAATCAAAGTGAAGAATGTATACAACAGTTTTTGGAAGCAATGAAAAGCTTTAAATTGACAAAGTCTGAAAAACTGATGATGGTTAATACACCTCCGAGAACTGAGCTGGAGATACAATTGATAGTACAGGAGAGTGAAGAGAGGCTATCTGAAGATGATGTCGCTAAAATTATATCAATAGTTAACAAAATTTTGCCCGTTAATTCATAA
>DPOGS209577-PA
MQILQKLKDNTQRKHKREASLATVTYETVHYLQNTECKNQSEECIQQFLEAMKSFKLTKSEKLMMVNTPPRTELEIQLIVQESEERLSEDDVAKIISIVNKILPVNS-