Monarch geneset OGS2.0

DPOGS209601
TranscriptDPOGS209601-TA1338 bp
ProteinDPOGS209601-PA445 aa
Genomic positionDPSCF300015 - 434449-438127
RNAseq coverage229x (Rank: top 44%)
Annotation
HeliconiusHMEL0072480.091.21% 
BombyxBGIBMGA009461-TA2e-2134.38% 
DrosophilaTraf4-PC8e-15861.29% 
EBI UniRef50UniRef50_E2B8N54e-17267.42%TNF receptor-associated factor 4 n=14 Tax=Pancrustacea RepID=E2B8N5_HARSA
NCBI RefSeqXP_967534.26e-17869.67%PREDICTED: similar to tnf receptor associated factor [Tribolium castaneum]
NCBI nr blastpgi|1892409731e-17669.67%PREDICTED: similar to tnf receptor associated factor [Tribolium castaneum]
NCBI nr blastxgi|1892409737e-17569.67%PREDICTED: similar to tnf receptor associated factor [Tribolium castaneum]
Group
Gene OntologyGO:00071653.4e-139signal transduction
GO:00082703.4e-139zinc ion binding
GO:00429813.4e-139regulation of apoptosis
GO:00055152e-40protein binding
KEGG pathwaytca:6558802e-177 
 K09848 (TRAF4)maps-> Small cell lung cancer
    Pathways in cancer
InterPro domain[9-445] IPR0122273.4e-139TNF receptor-associated factor TRAF
[286-441] IPR0133222.4e-58TRAF-type
[287-445] IPR0089742e-40TRAF-like
[310-438] IPR0020833.5e-18MATH
Orthology groupMCL15738 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS209601-TA
ATGTACAAATGGAAACGTAATCATTCAGTAAGGAGCCCTTGCTGCGAGCGCTTGTCTCGTCTACAATTGATAGCGCGCGAAAAACAAATCGTCGGCCATTTTGCATATTTTCTAACGATGTGCTCCATATTCGAACGTGCGATATATCCCGATCCAGAGTCGGAGAAGGCTATAATGGGTTCGGTGGTTTACTGCATCCACCACAAGGAAGGGTGCCAGTGGTCGGACGAGCTCCGCAAACTCAAGGCGCACCTGAACACCTGCAAGCACGATGCTGTGCTGTGTGCAGCTCAGTGCGGGGCGATGATCCCGAGGGTGTTGATGCAGGACCACCTGCGTTACACCTGCCCCCGGAGACGCGCCAACTGTGAACATTGCGGGAAGGAATTCTCCGGTAGCGCTCTGGAGGAGCACCAAGGAAATTGCGGTCATGAGCCGGTGTACTGCGAGAACAAGTGCGGGGCCAAGGTCCAGCGGCGGCACACCACGCAGCACGCCGCGCAGCACTGCAGCAAACGATTGGTGCCCTGCAGACACTGCGGCCAGCGGTATACACAGGATACAGTGTCAGCTCATGGCGCGTTATGTTCCCGGGCCCCGGTGCCGTGTCCCCAGCGGTGCGCGGCGGCCCCGGCCCGGGACGAGCTAGACGTTCACCTCCGGGAACACTGCACGGCCACCGCCGCCGTCTGCCTCTACAGAGACGCTGGCTGTCGGTTTAAGGGCACGAGACAGGCTCTGGAACGTCACACGGAAGAGAGTGCCCAACAACACTTAGCCCTGGTGTCAGCGCTGGCGACGCGTCAGGCTCGGCAGCTGGATTCGCTAAGGGCGGCCGTGGCCAGGCTCGCCGTGAACTGTAGCGGAGCCCTGGTTTGGCGCGTCACGGACTGGGCCGCCAAGATGGCCGACGCTAAGACCAAGGACGGCGTCGAGCTCACCTCACCCGCCTTCTACACCAGCCAGTACGGATATAAACTACAGGCGACGTTGTTCCTGAACGGTAACGGCGCAGGCGAGGGGACGCATATTTCCGTGTACATCAAGATCCTGCCGGGCGAGTACGACGCTCTCCTGCGGTGGCCGTTCGCCCACTCCGTGTCCTTCACGCTGTTCGACCAGAGCTCGAGCCCGGAGCGCGCCTGCAACATCGTGGAGAGCTTCGTGCCGGACCCCACCTGGAAGAACTTCCAGCGGCCGTCCAAGGAGCCGGACGCGCTCGGCTTCGGCTTCCCGCGCTTCGTGTCGCACGAGATGCTCAAGAAGAGGAACTTCGTCAAGGACGACGTCATGTTCCTCAGGGTCAAGGTCGACCCCAGCAAGATCGTCGCCGTATAG

Protein sequence:

>DPOGS209601-PA
MYKWKRNHSVRSPCCERLSRLQLIAREKQIVGHFAYFLTMCSIFERAIYPDPESEKAIMGSVVYCIHHKEGCQWSDELRKLKAHLNTCKHDAVLCAAQCGAMIPRVLMQDHLRYTCPRRRANCEHCGKEFSGSALEEHQGNCGHEPVYCENKCGAKVQRRHTTQHAAQHCSKRLVPCRHCGQRYTQDTVSAHGALCSRAPVPCPQRCAAAPARDELDVHLREHCTATAAVCLYRDAGCRFKGTRQALERHTEESAQQHLALVSALATRQARQLDSLRAAVARLAVNCSGALVWRVTDWAAKMADAKTKDGVELTSPAFYTSQYGYKLQATLFLNGNGAGEGTHISVYIKILPGEYDALLRWPFAHSVSFTLFDQSSSPERACNIVESFVPDPTWKNFQRPSKEPDALGFGFPRFVSHEMLKKRNFVKDDVMFLRVKVDPSKIVAV-