DPOGS209624 | ||
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Transcript | DPOGS209624-TA | 2088 bp |
Protein | DPOGS209624-PA | 695 aa |
Genomic position | DPSCF300015 + 766209-776171 | |
RNAseq coverage | 801x (Rank: top 16%) |
Annotation | ||||
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Heliconius | HMEL017017 | 0.0 | 73.60% |   |
Bombyx | BGIBMGA006689-TA | 0.0 | 65.85% |   |
Drosophila | CG17544-PB | 0.0 | 49.78% |   |
EBI UniRef50 | UniRef50_UPI000224628C | 0.0 | 50.78% | UPI000224628C related cluster n=1 Tax=unknown RepID=UPI000224628C |
NCBI RefSeq | XP_317446.4 | 0.0 | 50.64% | AGAP008016-PA [Anopheles gambiae str. PEST] |
NCBI nr blastp | gi|158297173 | 0.0 | 50.64% | AGAP008016-PA [Anopheles gambiae str. PEST] |
NCBI nr blastx | gi|91091178 | 0.0 | 52.74% | PREDICTED: similar to AGAP008016-PA [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0003997 | 1.9e-212 | acyl-CoA oxidase activity | |
GO:0006631 | 1.9e-212 | fatty acid metabolic process | ||
GO:0050660 | 1.9e-212 | flavin adenine dinucleotide binding | ||
GO:0005777 | 1.9e-212 | peroxisome | ||
GO:0055114 | 1.9e-212 | oxidation-reduction process | ||
GO:0016627 | 6e-47 | oxidoreductase activity, acting on the CH-CH group of donors | ||
GO:0008152 | 5.4e-44 | metabolic process | ||
GO:0003995 | 2.7e-39 | acyl-CoA dehydrogenase activity | ||
GO:0006635 | 5.8e-38 | fatty acid beta-oxidation | ||
KEGG pathway | aga:AgaP_AGAP008016 | 0.0 |   | |
  | K00232 (E1.3.3.6, ACOX1, ACOX3) | maps-> | Peroxisome | |
  |   |   | Fatty acid metabolism | |
  |   |   | Biosynthesis of unsaturated fatty acids | |
  |   |   | PPAR signaling pathway | |
  |   |   | alpha-Linolenic acid metabolism | |
InterPro domain | [1-695] IPR012258 | 1.9e-212 | Acyl-CoA oxidase | |
[3-664] IPR023570 | 5.4e-171 | Acyl-CoA oxidase, peroxisomal | ||
[315-480] IPR009075 | 6e-47 | Acyl-CoA dehydrogenase/oxidase C-terminal | ||
[11-294] IPR009100 | 5.4e-44 | Acyl-CoA dehydrogenase/oxidase | ||
[163-293] IPR006091 | 2.7e-39 | Acyl-CoA oxidase/dehydrogenase, central domain | ||
[513-690] IPR002655 | 5.8e-38 | Acyl-CoA oxidase, C-terminal | ||
[307-468] IPR006090 | 1.9e-06 | Acyl-CoA oxidase/dehydrogenase, type 1 | ||
Orthology group | MCL17809 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS209624-TA
ATGGAAGATCTTAGTTTTGTCCCGGATCTCCCGAAGGGGCCCCTAGACGTTTATCGAAATACCGCCTCCTTTAACTGGAAGCGACTTAAATTGGCCCTTGAAGGCGATATTGATTCACTAAAATTAAAGTACAAGATATGGCGGACGTTGGAAAAGGATCCCTTGTTTGCACATTCCGCTGTGACATTACCAGTTGAAGAACAGAAGAGAATCACTCAGCTGCAGTTAAAGAAGATCAACGAGTACAAGTTCATACCGAAAGAGATGTTCAACGCCAGCTACAGCAACGCCCATTATGTCCGTATATTCTTCTTTCAGACGCGAACCATAATGACTATCAACGAGGCCGTGCAGTCCCTCAACCCCAGCGTGTCAGTGAAGATGGCCATCGGTATATATCTGTTCTCCAACGCGCTGCTCTCGCTCGGCACCGAGAGGCATTTGAAATTCTACGAAGCAACCATTAAAACGCGTGAGATCCTAGCAAGTTTCGCTCTAACGGAGGTGGCGCACGGGTCGGACGCGCGTCTGATGCGGACCACCGCCACCTATGACCCCTCCACCCGGGAGTTCGTCATCCACACGCCGGACTTCGAAGCAGCCAAATGCTGGGTTGGTAATCTAGGTAGGACTTGCACACACACGCTGCTGTTCGCCCAGCTGATCACACCGGACGGCACCAACCACGGCCTGCACGGGTTCATGGTGCCCATAAGGAACCCGGACACGCTGGAGACGTACCCCGGCCTCATAGTGGGGGACATGGGAGAGAAGATCGGCGTCAACGGTATCGACAACGGGTTCATAATGTTCAATCAGTACCGGATACCGCGGGAGAACCTTCTGAACAGAACTGCTGACGTCACAGAGGATGGCACCTACGAGAGTTCCTTCTCAGAACCTTCCAGAATACTGGGAGCGGCTCTGGAGAATCTGTCTGCTGGTCGTATCGGCATCATGCAGGAGAGCTGTCATTCTCTGTCCAGCGCCGTGTCTATAGCGGTGAGGTACGCTGCTTCCAGGACACAGTTCGGGGACAGACAGAAGGAAACACCGCTCATCGAGTACGAACTACACCAATGGCGTCTGTTCGGCCACGTGGCGGCCGCGGTCGTGTTCAGACTGTATATAGAGAGCTTCACCAAGACATACCTCGAGATAGCAGAGAAATCCAACGCGGGTCATAGGGTCGACAACTTGAGCGAGACGGTGTCTGAGATCCACGCGATGGTGTCCTGCAGTAAGCCGCTGTTGACGTGGAGCGTGCTGAGGGCGGCGCAGCAATGTAGGGAGGCCTGCGGCGGACACGGCTACCTTAAGTGTTCGAACCTGGGCGACATCCGCAGCAACCACGAGCCGACCGTGACGTACGAGGGAGACAACAACGTGCTGTCGCAGCAGGCCGGCAACTGGCTGCTGAGGCAGTACGAGGCGGCGCGAGGGGGCGCGCTCCCCGACACGCCGCTCGGCACGCTCGCCTTCCTCACGGACGACGCCAGCCTCCACCGCACCTTCGCCTGCACCAGCACCGAACAGCTCAAGAATCCCGACTTCATACTATCGACATACAAGTGGCTTCTGACCTGGATGTTGAAGTACACGCACGAGAAGAACGAGTCCGAGCTGGCCAAGGGTCTGACGAAGGTCCAGGCGAGGAACAAGTCGCAGGTGTACAGGTGGAGGACCCTCACCAAGGTGTACGCTGAGTACCTCACGCTCATGATATCGCTGGGGAGCATCGACAGGAAGGAGCCGGGGCTCAAGCCGGTGTTGATGAAGCTGTACTGCCTCTACGGACTCAGTGTGCTGGACGAGAACCTGGTGGAGCTGTACCAGGGAGGGTTCGCCAAGGGCGGGGACTGCGCGCGCCTCGTACGAGACGCTATCCTGGAACTGTGCGCGGACGTGAAGGGCGAGGTGGTGAGCGTGGTGGACGCACTCGCTCCCACTGACTTCGTTCTCAACTCTGTGTTGGGCAGGAGCGACGGAAAGCTGTACCAGAACCTCCAGAAGTCGTTCTTCAGCCAGCCCGGTGTGTTCGAGCGCGCTCGCTGGTGGCGCGAAGTGGTTCCCGCATCCAAACTATAA
>DPOGS209624-PA
MEDLSFVPDLPKGPLDVYRNTASFNWKRLKLALEGDIDSLKLKYKIWRTLEKDPLFAHSAVTLPVEEQKRITQLQLKKINEYKFIPKEMFNASYSNAHYVRIFFFQTRTIMTINEAVQSLNPSVSVKMAIGIYLFSNALLSLGTERHLKFYEATIKTREILASFALTEVAHGSDARLMRTTATYDPSTREFVIHTPDFEAAKCWVGNLGRTCTHTLLFAQLITPDGTNHGLHGFMVPIRNPDTLETYPGLIVGDMGEKIGVNGIDNGFIMFNQYRIPRENLLNRTADVTEDGTYESSFSEPSRILGAALENLSAGRIGIMQESCHSLSSAVSIAVRYAASRTQFGDRQKETPLIEYELHQWRLFGHVAAAVVFRLYIESFTKTYLEIAEKSNAGHRVDNLSETVSEIHAMVSCSKPLLTWSVLRAAQQCREACGGHGYLKCSNLGDIRSNHEPTVTYEGDNNVLSQQAGNWLLRQYEAARGGALPDTPLGTLAFLTDDASLHRTFACTSTEQLKNPDFILSTYKWLLTWMLKYTHEKNESELAKGLTKVQARNKSQVYRWRTLTKVYAEYLTLMISLGSIDRKEPGLKPVLMKLYCLYGLSVLDENLVELYQGGFAKGGDCARLVRDAILELCADVKGEVVSVVDALAPTDFVLNSVLGRSDGKLYQNLQKSFFSQPGVFERARWWREVVPASKL-