| DPOGS209676 | ||
|---|---|---|
| Transcript | DPOGS209676-TA | 336 bp |
| Protein | DPOGS209676-PA | 111 aa |
| Genomic position | DPSCF300134 - 58309-61026 | |
| RNAseq coverage | 41x (Rank: top 72%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL013916 | 5e-29 | 93.22% | |
| Bombyx | BGIBMGA000515-TA | 7e-46 | 77.48% | |
| Drosophila | SF2-PA | 1e-06 | 37.14% | |
| EBI UniRef50 | UniRef50_F4WK53 | 4e-17 | 67.80% | Insulin-like growth factor 2 mRNA-binding protein 3-A n=4 Tax=Formicidae RepID=F4WK53_ACREC |
| NCBI RefSeq | XP_001814070.1 | 5e-25 | 67.53% | PREDICTED: similar to RNA binding protein Vera [Tribolium castaneum] |
| NCBI nr blastp | gi|189237156 | 1e-23 | 67.53% | PREDICTED: similar to RNA binding protein Vera [Tribolium castaneum] |
| NCBI nr blastx | gi|189237156 | 8e-22 | 67.53% | PREDICTED: similar to RNA binding protein Vera [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003676 | 1e-14 | nucleic acid binding | |
| GO:0000166 | 2.5e-14 | nucleotide binding | ||
| KEGG pathway | ||||
| InterPro domain | [3-70] IPR000504 | 1e-14 | RNA recognition motif domain | |
| [2-77] IPR012677 | 2.5e-14 | Nucleotide-binding, alpha-beta plait | ||
| Orthology group | MCL19713 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209676-TA
ATGAACAAACTGTATATCGGCAACTTGCCGACAGAGGCTGATGAGGCGGCTGTAAGACAACTGTTCGCGGAGCACAACCTCACTGTAGCTGATATATCAGTAAAAAGAGGAGGTTACGCATTTGTCGACTTCCCTGACCAGTCGGCTGCAGATCGCGCCATTGATAAGCTGCATGGTTATTCCTACTGCGGCCTACCGTTGATTGTGGAACCTTCAGTCGCAAATAAAAAAATTGTGAACGTGACCACCTTGCAAAGCGCGAGTACCACCCAGCTGAAGGAGACCAGCACAACTGACTCGTCCAATACAGGAGGTGGAGGTGGAGGCTGGAGGTGA
>DPOGS209676-PA
MNKLYIGNLPTEADEAAVRQLFAEHNLTVADISVKRGGYAFVDFPDQSAADRAIDKLHGYSYCGLPLIVEPSVANKKIVNVTTLQSASTTQLKETSTTDSSNTGGGGGGWR-