Monarch geneset OGS2.0

DPOGS209686
TranscriptDPOGS209686-TA819 bp
ProteinDPOGS209686-PA272 aa
Genomic positionDPSCF300134 + 278953-281611
RNAseq coverage46577x (Rank: top 0%)
Annotation
HeliconiusHMEL0084613e-6880.51% 
BombyxBGIBMGA000526-TA3e-7177.29% 
Drosophilayps-PA6e-4182.11% 
EBI UniRef50UniRef50_A2A2462e-6076.32%Y-box protein n=4 Tax=Obtectomera RepID=A2A246_BOMMO
NCBI RefSeqNP_001036897.14e-6976.92%Y-box protein [Bombyx mori]
NCBI nr blastpgi|1129827926e-6876.92%Y-box protein [Bombyx mori]
NCBI nr blastxgi|1129827923e-11179.85%Y-box protein [Bombyx mori]
Group
Gene OntologyGO:00036771.5e-25DNA binding
GO:00063551.5e-25regulation of transcription, DNA-dependent
GO:00036762.8e-20nucleic acid binding
KEGG pathway 
InterPro domain[40-108] IPR0020591.5e-25Cold-shock protein, DNA-binding
[32-110] IPR0160271.4e-23Nucleic acid-binding, OB-fold-like
[41-109] IPR0111292.8e-20Cold shock protein
[40-107] IPR0123403.5e-20Nucleic acid-binding, OB-fold
Orthology groupMCL26706 Lepidoptera specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS209686-TA
ATGGCTGATACCGAAAAGGCGCCGCAGCCGCAGCCCCAGCAGCAGCAGCAGCAGCAACCTGAACAACAACCCCAACCTCAACAAGTTAAACAAAAAAAGCAGGTTATTGCTGAAAAAGTTTCGGGCACTGTAAAATGGTTTAACGTCAAGAGTGGATATGGCTTCATCAACAGAAACGACACCAAGGAGGATGTGTTTGTACACCAGACAGCTATCGCCCGTAATAACCCACGTAAGGCTGTGCGCTCGGTTGGCGACGGCGAGGCGGTGGAGTTCGCCGTTGTGGCCGGCGAGAAAGGCTATGAAGCAGCCGGAGTGACCGGCCCCGGCGGCGAGCCGGGGAAGGGCTCGCCCTACGCTGCTGACAAACGTCGGGGCTTCCCACGCCAGTTCTACATTCCTCGGCCTGGAGGCGGACGTGGCGGCGAGGGGGCTCCACGAAGAGGTGGCATGGGACGTCGCGGGCCCCCGCCCACACAGGGGGGCGCGCAAGGAGATGAGGGCCAAGAAGTTGCTGGAGGCCCACCGCAACGCAGCTACTTCCGTCGTAACTTCCGTGGCGGAAGACGTGGCGGTGGCGGTCCCCGTCCGATGTACCGTGGCGGGTACAGGTATGTGCGCCCGCGCAACAACCAGCCGGGCCAGAACCAGAACCAAGGTCCAGTTCAAAACCAGGGACAACCGGCCCTGAGACAGAATGGCCAGGAGGGAGAGGCTCAAGCATCTGCTTCCACGGCACCGGCTCAGCCCAAGGCCAAGCCCAACAACAAGCCCACGGGCACCACAATTGAAACCACCACCAATGAAAGCCAGGCCTAA

Protein sequence:

>DPOGS209686-PA
MADTEKAPQPQPQQQQQQQPEQQPQPQQVKQKKQVIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGYEAAGVTGPGGEPGKGSPYAADKRRGFPRQFYIPRPGGGRGGEGAPRRGGMGRRGPPPTQGGAQGDEGQEVAGGPPQRSYFRRNFRGGRRGGGGPRPMYRGGYRYVRPRNNQPGQNQNQGPVQNQGQPALRQNGQEGEAQASASTAPAQPKAKPNNKPTGTTIETTTNESQA-