Monarch geneset OGS2.0

DPOGS209688
TranscriptDPOGS209688-TA5634 bp
ProteinDPOGS209688-PA1877 aa
Genomic positionDPSCF300134 + 312063-327885
RNAseq coverage1310x (Rank: top 10%)
Annotation
HeliconiusHMEL0084580.062.26% 
BombyxBGIBMGA000528-TA0.061.72% 
DrosophilaeIF4G-PB7e-9926.88% 
EBI UniRef50UniRef50_D6WNL52e-16737.58%Putative uncharacterized protein n=3 Tax=Tribolium castaneum RepID=D6WNL5_TRICA
NCBI RefSeqNP_001161331.11e-15036.81%eukaryotic translation initiation factor 4 gamma [Nasonia vitripennis]
NCBI nr blastpgi|2700073176e-16737.58%hypothetical protein TcasGA2_TC013876 [Tribolium castaneum]
NCBI nr blastxgi|2700073170.029.96%hypothetical protein TcasGA2_TC013876 [Tribolium castaneum]
Group
Gene OntologyGO:00160701.3e-75RNA metabolic process
GO:00054885.5e-60binding
GO:00055151.8e-50protein binding
KEGG pathwaynvi:1001155143e-150 
 K03260 (eIF-4F, EIF4G)maps-> Viral myocarditis
InterPro domain[1070-1308] IPR0160211.3e-75MIF4-like, type 1/2/3
[1068-1308] IPR0160245.5e-60Armadillo-type fold
[1079-1307] IPR0038901.8e-50MIF4G-like, type 3
[1519-1628] IPR0038912e-09Initiation factor eIF-4 gamma, MA3
[1795-1873] IPR0033071.9e-06eIF4-gamma/eIF5/eIF2-epsilon
Orthology groupMCL11055 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS209688-TA
ATGCCGGTGACCGTGTCTCCATTGTTCTGGGAATGGTTCAATATCTGGCTAATACAATTTTTGAAGAATTTATATTATGAAATTAAGATGGTCGCTCTGAGAGGTGGTAACAGTTCATTGAGCACTGTGACGCACGGCTGCGGGATTCACGGTGGACAACAAAATGCCCTGGATTTGACACATCGTTTACAAACATCGCTTGGAATGCAACTCGGGACTGCGTCGCATGCGGTTGGCCATCACACTAGCCATTTAAATCACGCCAGCCATGGCAATCACTCGAACCACGGCAGCCATACGAACCACGGCCACGGAAACCAGTTGAACATACCATCGCTGAGTAACGTGTCGGTGCTGATGCCGCAACAGAATGCAGCCTCGCTCAAGCACGAGCAGAATACGCGCTATTCTAGTTCCAACTGCATGCTGCAATCGCACCACTACAGACGGTTGACGCAATCTATGTTATTAGATCATTACAACAACATAACGCAAGTGCCCGCTTCAGGACCGGAATGTTACCATCCGTCGACGGGTAACGGAGCATATATGTCCACCCAGACTCAAAACATGCGAGGTCAGCCCTCACAGCCGTCAGCACCGCCGGCGCCTCAGCAGGACATGTCCAAGACAACCATGGCTGGTTCCACGTACGTGTCACCTCAAACCCAAACTCCGCCGTCGCGGCCCCAGTATCCAAACTTCCCCTACAGAGCTTCCCAACACGCCAACAGGCCTAATTCGCACCCTAGACAACAACAGCAGTACATGGGAAGCGCGGGTGCAACAACGGCTGGTCCCGTTATGTATCACCATGCCTTAGTGTTCCCTCCAACACACATGGGCATCCCACAAAGCTACCCGCAGCCGCGCTCCAGTACACCTGGGTACTATCAATATGTGGCGCCTTATATAAGTTATACCACACCCGCCGGTCACACTCCACCCTATTATTATCCAACCAACGGGCAGCAGTTGGCGGCGGGCAGTGTCGGTGGTAACGGTGGTCGTACTAACCCTGGCTCGTTGGTACCGCCGCAGGGCGCCGCGCCGGCTGCTCCCTCGCTGCAGCACCCACAGCAGCAACCCCTCTTACACGCCACCATTCCCGGTATACGTACGGTCCCTCCAAAACGTACATCCCATAGACTTGCAATTATTAATCCCTTAACGAAACAAGATATATTTTCGGAACAATGTAATAATGATAGCCAATTTATTAGTGGTGATTCAAGTGATCGGCAAACTCCTCAACCAGAACAGCAACCAACACATAGTGCCGCCGAGGAGTTTCTAAGAATGGTTAATGAAGTAGCGAATCAGCCATCAGCTAGTGAAAGTGCTAGTAAATCGAACTTTGTTTCTAAGAATGTCGAAGTGCCTGCCACAAACGCAAGCTCCAATCAACCTCATACAAACGCAATAAGTACTATTAATAGTAATAATATAAAGTCTGAAATATTAATTGTTAATGAAAGTAAAAATGTAGGATCTGAAATTATAGAGTCCAACGAAACGCCGGTTGTATCGGCAATATCGGATAGTCCCGTTGTAGTGCCTAAAATGACTGTGAATACTAAACAACTCCAAAAGAATAGTGAACAGAATCTGCCTTTAACCATAGATAATAGTAAGATTATACCGAATAGTAAGCCACAAAAACAAAACAAGATCAAACCAGTTGTGCCTCAAGATGAAATAGAAAAGCAATCAGAAATAGTGAATTCTATAGTTCCTCAAAGCGTTCAAGGTATTATTATACAAGCGCCTTCTGAAGCGGTTAATTCCGTTTCTCCTCCGAGCGACACTCCGGTGTCGCCGGCGGTGCCTGCACCAGTGCCAGAAGTAGCGCAATCAGTGCCGGTGCCGGTGCCGGTGCCGTCAATGGGGTCAGCTCTCTCTTCTCTGACGCCTGCACCACCACAGCCACAGAGAATAAGAGAGCCCCGAGATCGAAACAGATCAGAAGATAAAGAAAAACAGACAACTAAATCTAAGGAGCAAGATAAAGATACATCCAAAGCAAACGGTCCTGTTTCGGTTGAGATTAGTTCAGTTGATAGTATACGAAATACTATCAAACCTCTAACTAGTCAAGTAAATCAAAACCTGGAAGCAGATATACCAAAAAAGCAACCAGAATTAGAGACTGAGAAAACAAGCGATAAGAAACCTGAGGTTGTGATTAACAGAGAGCCTACATTCCCCGTCAAACCTACCCCCACTGCCACTGAATTGTTGTCTGCTAGTATTGAAAAGGTTGCCAAAGAGCAACCACAAGTAGTGCCTGAAGTGTCACCTAAAAAAGAAGAATCCATTACAATCCAAGCCCAAGCCAAACTAACTCAAAGTATAGCAAGTGCTGCACGGAATCAAACTGAATCTAAAATGAAAGATATTAATCTGAATAATAAAACAGATCCTGATACTGCTAATGGAAATTCCACTGAAGCTACTAAGATGGAAGCAGTGAAAGATGAAGGAAACAAAAATGAAAAAGCTGTAAAGAATTCTAAAAATAATAACAAAAAGTCTAATAAAAATTCAAATTCTGAAGTTGCTCCAAAAGAAACAGAAGCATATGAAAATGGTAAAGAAGAGATTGAAAAAATTACAAGCAAACAAGAGAAAGTTGTAACTCCGGAAGAAGAATCAACTGAAATGGCTGAAAACTCTGCACCAACTGCAGTTCCAGAAGCTCCAACACCTGCACCAGTTTCAGCACCTGCACCAGCTGTTTTTGTTCCTAAATATAAATACTCTGATGATCAATGGTCTCCCCTAAACAAGTCTGGTAAAAAGACTTATGACATAGGTTTACTTATGCAAATAAAAGATGATCCTCTATGCAAGAACAAACCCAATGCTCCCTTGTTAGAGGCATGCAATGTGATGCGGACTGCGCCAATTCAAGAGCCAATGTCATTTAATGCAATTTCAAGACCAATGAACGATGCAGTGTTATTCCCCAACTTCCTTAAGAATTCTAGTGTTGGTAACAGAAACAACGCTCCGAGGGAACACAAAAAAGATGGCCGAAACTTGCCTCAGAGTGGTAAGAGCAGCGTTAAATTGACACCATCAGGTAGTGGAAGCAGTGGTCACAAACCTGTTATACATGTGTCACTCTCGCTGCGTGAGGAGGTGAAGCTTAACCAAACTAAGGATGCCTGGAGACCTACAAGGTTCAAGAAAGAAAATCTTTCTGAGGAGGAGGCCAAGACACAGGACCTATACAAGAAGTTCCGTGGTATTCTTAACAAACTCACTCCACAAAAATTCGATACATTGCTGGACAGAGTCAAGTCCCTTGAAATCAATACACAAGCTCGTCTCGAAGGTGTTATTGATTTGGTTTTCGAAAAAGCCATTGATGAACCGAATTTCTCTGAAGCTTATGCTGCTATGTGCAGTAAACTTTCCATGTTAAAGGTACCTTCCAACAATGCTCCTGAGCAATGTGTCAACTTCCGAGCACTGATTGTCACAAGATGTCAGAACCAATTTGTTACGGATAAAGTGGATGAACAAGTACTCAAAATAGAGAAAGAGATCAGTGAATGCACTGACCCTACCAAGAAAAAAGAATTGCAACTTCAACTTGAAGAAGAAAACAGGCGTGTCAGAATGAGATCAGTGGGAAATGTCAGATTTATAGGTGAACTGTATAAACTAAAAATGCTTACATCCAAGATTATGGTCTACTGCATGACTTACTTAATTGACAAACTGGAAGAAGAGAAATTGGAATGTCTTTGCAAACTCCTCACTACCATTGGTGAACAAGTAGAAAGTGAAGTAAAAGAGCAACTAGAAAGTGTCTTCAAGAAGATGCAGGATATTGTTGATCGTAAATCAAATAAAATAAGCAGCAGAGTGCGATTTATGATTCAAGATGTGATTGAGCTTAGAAAACGAAGATGGTTTGCTAAGAATGTTGTAGACTTGCAGCCCAAGATGATGGATCAGATTCAGAAGGAAGCCGAACAGCAACAACGGCATATTGAGTTAATGAACGCTGCTCCAATGGGCGGTGGATTCCGTCGTGAGGACGGAGGCCGCAATAAACGTGGCGGTCGTCAAGGCTCCAATTCATTCCTGGATAACCAGTGGAAAGCCTCAACCAACTACAATCGCACCAACTACACTGTTGATACCTCTAAATTTAAGGCGGTAACACAAAAGAATCTTACTGATATTAAACTGGCTCCACATAACTCTGCTTGGAACCATGGATCTGGAACAAAGAATACAGCTCAAGCTAGTAGTAACTCTATGATTAGTCTGTCCAAAAATATGTACAGCATGCTTGAAAATGTGCAAGCAGATCCTACATCACTCAGAACAAAAGATCTCTCTCCTGGTTATCAACATTCAAAGTCCATCGAGCGATCAACCTTCAATTCCAGAGGAAATGGCAGTAACAGTCGTTCCGGATCAGTTGGAGTCACAAGATCTAACTCTAGCAGCCGAGGCCCGGCCACGCCTGCGCCGCCACAAGAGAATACACCAGCAGCTCCTGTCCCACAGGAACCTCTACCCGAAGCTAAAAAGAAGGCATTCAAAATGCTCATCATGGACAGATTTGTCAATCCCAACGACGATGATTTGGTGTCGGAGATCAAACAAACCGTCGCGCCGCAGTATCACGCCGCTTTGGTCACGGAGACCCTGAATATTGCACTAGAAAAATCAGCAAAGGAGATTCAGATTATTTCTAAAACACTACTCCATTTGGTTTCGACTGGATTTATATCAGCTGAGAACTTCGTGACTGGAATCAGCGAGATTATGGAATTCGCATCCGATCTTTACATTGATATACCGATGTTATACGAGTACTTAGGGAAGATTATAGTACCACAAATTGAAAAGAAGCATATCACATTTGTACAAACATTTAGATTATCTGAAAACATAATACAATCCAAGCACGGCCACTTGTTCTTAAAAGCAATAATAAAAGACTTAAAGGATAGCATGGGACCTTCTTTCGTAAAAACGAAATGGCAAGAATCTGGTCTTGAACTGAAGCAATGGATGAGTGAAGATCAGATACCAAAATGGCTAGAAGATAATAAATTTGAATTCTTGGAGGGTGGTAAGTCCAGTGAAGAGACGAAAAAGATTCTTACGCCACAAGAAACGCAAAGCAAATTACTACAGCTCATAAATAACGACGAGAACTGTGATTGCATACGAGGATGGGTTCAGGATAATCTGGGTGCGTCAGCTAATGAAGACTGGTTTATGCGTGCTTTAATACAACCAATTTGCGAGTACGCATTATACGGAACTGAAGGACGTGATGTACCGCACTTTAGCCATGAACGTATGAATAAATACGTTCCGCTCATAAGCGAGTTCGGTGAATCGCGTGATCAACGTGAACTTTACTGTTTATTCGGAATACAGCAATTTATACATAGACTGGAACACCCTCAAGGGCTAACTTTAGATATATTCCAATATTTACACGAACAATATATAATATCTGTAGAAGGGTTTATTGCATGGGAAGAATCTGAGATGGAGCCGGAAGGCAAGGCGGTGATGCTTAAGGCACTCACGTCATTCTTCACTAATATTAAGGAGGCGGAGGCCGACAACGAGGAATCTGGTAGCGAGGAATGA

Protein sequence:

>DPOGS209688-PA
MPVTVSPLFWEWFNIWLIQFLKNLYYEIKMVALRGGNSSLSTVTHGCGIHGGQQNALDLTHRLQTSLGMQLGTASHAVGHHTSHLNHASHGNHSNHGSHTNHGHGNQLNIPSLSNVSVLMPQQNAASLKHEQNTRYSSSNCMLQSHHYRRLTQSMLLDHYNNITQVPASGPECYHPSTGNGAYMSTQTQNMRGQPSQPSAPPAPQQDMSKTTMAGSTYVSPQTQTPPSRPQYPNFPYRASQHANRPNSHPRQQQQYMGSAGATTAGPVMYHHALVFPPTHMGIPQSYPQPRSSTPGYYQYVAPYISYTTPAGHTPPYYYPTNGQQLAAGSVGGNGGRTNPGSLVPPQGAAPAAPSLQHPQQQPLLHATIPGIRTVPPKRTSHRLAIINPLTKQDIFSEQCNNDSQFISGDSSDRQTPQPEQQPTHSAAEEFLRMVNEVANQPSASESASKSNFVSKNVEVPATNASSNQPHTNAISTINSNNIKSEILIVNESKNVGSEIIESNETPVVSAISDSPVVVPKMTVNTKQLQKNSEQNLPLTIDNSKIIPNSKPQKQNKIKPVVPQDEIEKQSEIVNSIVPQSVQGIIIQAPSEAVNSVSPPSDTPVSPAVPAPVPEVAQSVPVPVPVPSMGSALSSLTPAPPQPQRIREPRDRNRSEDKEKQTTKSKEQDKDTSKANGPVSVEISSVDSIRNTIKPLTSQVNQNLEADIPKKQPELETEKTSDKKPEVVINREPTFPVKPTPTATELLSASIEKVAKEQPQVVPEVSPKKEESITIQAQAKLTQSIASAARNQTESKMKDINLNNKTDPDTANGNSTEATKMEAVKDEGNKNEKAVKNSKNNNKKSNKNSNSEVAPKETEAYENGKEEIEKITSKQEKVVTPEEESTEMAENSAPTAVPEAPTPAPVSAPAPAVFVPKYKYSDDQWSPLNKSGKKTYDIGLLMQIKDDPLCKNKPNAPLLEACNVMRTAPIQEPMSFNAISRPMNDAVLFPNFLKNSSVGNRNNAPREHKKDGRNLPQSGKSSVKLTPSGSGSSGHKPVIHVSLSLREEVKLNQTKDAWRPTRFKKENLSEEEAKTQDLYKKFRGILNKLTPQKFDTLLDRVKSLEINTQARLEGVIDLVFEKAIDEPNFSEAYAAMCSKLSMLKVPSNNAPEQCVNFRALIVTRCQNQFVTDKVDEQVLKIEKEISECTDPTKKKELQLQLEEENRRVRMRSVGNVRFIGELYKLKMLTSKIMVYCMTYLIDKLEEEKLECLCKLLTTIGEQVESEVKEQLESVFKKMQDIVDRKSNKISSRVRFMIQDVIELRKRRWFAKNVVDLQPKMMDQIQKEAEQQQRHIELMNAAPMGGGFRREDGGRNKRGGRQGSNSFLDNQWKASTNYNRTNYTVDTSKFKAVTQKNLTDIKLAPHNSAWNHGSGTKNTAQASSNSMISLSKNMYSMLENVQADPTSLRTKDLSPGYQHSKSIERSTFNSRGNGSNSRSGSVGVTRSNSSSRGPATPAPPQENTPAAPVPQEPLPEAKKKAFKMLIMDRFVNPNDDDLVSEIKQTVAPQYHAALVTETLNIALEKSAKEIQIISKTLLHLVSTGFISAENFVTGISEIMEFASDLYIDIPMLYEYLGKIIVPQIEKKHITFVQTFRLSENIIQSKHGHLFLKAIIKDLKDSMGPSFVKTKWQESGLELKQWMSEDQIPKWLEDNKFEFLEGGKSSEETKKILTPQETQSKLLQLINNDENCDCIRGWVQDNLGASANEDWFMRALIQPICEYALYGTEGRDVPHFSHERMNKYVPLISEFGESRDQRELYCLFGIQQFIHRLEHPQGLTLDIFQYLHEQYIISVEGFIAWEESEMEPEGKAVMLKALTSFFTNIKEAEADNEESGSEE-