DPOGS209813 | ||
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Transcript | DPOGS209813-TA | 558 bp |
Protein | DPOGS209813-PA | 185 aa |
Genomic position | DPSCF300117 + 80599-82173 | |
RNAseq coverage | 272x (Rank: top 40%) |
Annotation | ||||
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Heliconius | HMEL006762 | 3e-55 | 57.58% |   |
Bombyx | BGIBMGA007987-TA | 2e-54 | 52.41% |   |
Drosophila | PGRP-SA-PA | 9e-34 | 40.61% |   |
EBI UniRef50 | UniRef50_Q8WSZ1 | 4e-52 | 54.34% | Peptidoglycan recognition protein n=4 Tax=Obtectomera RepID=Q8WSZ1_BOMMO |
NCBI RefSeq | NP_001037560.1 | 9e-53 | 54.34% | peptidoglycan recognition protein S2 [Bombyx mori] |
NCBI nr blastp | gi|112982725 | 1e-51 | 54.34% | peptidoglycan recognition protein S2 precursor [Bombyx mori] |
NCBI nr blastx | gi|112982725 | 2e-51 | 52.94% | peptidoglycan recognition protein S2 precursor [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0008745 | 8.2e-55 | N-acetylmuramoyl-L-alanine amidase activity | |
GO:0009253 | 8.2e-55 | peptidoglycan catabolic process | ||
GO:0008270 | 2.5e-50 | zinc ion binding | ||
KEGG pathway |   | |||
InterPro domain | [1-184] IPR017331 | 1.2e-78 | Peptidoglycan recognition protein, PGRP-S | |
[13-181] IPR002502 | 8.2e-55 | N-acetylmuramoyl-L-alanine amidase domain | ||
[19-182] IPR015510 | 3.6e-52 | Peptidoglycan recognition protein | ||
[18-159] IPR006619 | 2.5e-50 | Peptidoglycan recognition protein family domain, metazoa/bacteria | ||
Orthology group | MCL21171 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS209813-TA
ATGCTGTTTTTGTGGGTTTTTGCTGCAATATTTTCTTTAGTTTCTTCGGATTGTAATGTTGTGCCCATAGAAGAATGGAGCGGTTCAAATTCAAACCGAGTGGAGAAACTGCCAAAACCAGTAAATCTAGTAATCATCCAACACACTGTTACCACCCAATGCTTTACCGATACAGATTGTAACAAAATAATTAATGTCATTAGAAACTATCACTTAAATGATAGGGGTTTCACGGATATTGCGATGTCATTCCTAGTTGGAGGGAACGGTAAAATATATGAGGGTGCAGGTTGGCACGTTGGTTCTCACACTCGAGGTTACAATAACAGATCCATTTCTTTATCTTTCATTGGGGACTTCAGAACAAAATTACCAAGCACTGAAGCACTGCAAGCAGCGATTGATTTTCTGAATTGTGCATTTTATAAAAATTATTTAACCATGGACTATAGTTTAGTAGGAACTCAGCAACTTATACCAACTTTAAGTCCTGGAGAAAAATTGCAAAGTCTGATAAAGACTTGGCCTCATTGGAAAGAAGATGTTAGTCAACTTTAA
>DPOGS209813-PA
MLFLWVFAAIFSLVSSDCNVVPIEEWSGSNSNRVEKLPKPVNLVIIQHTVTTQCFTDTDCNKIINVIRNYHLNDRGFTDIAMSFLVGGNGKIYEGAGWHVGSHTRGYNNRSISLSFIGDFRTKLPSTEALQAAIDFLNCAFYKNYLTMDYSLVGTQQLIPTLSPGEKLQSLIKTWPHWKEDVSQL-