| DPOGS209813 | ||
|---|---|---|
| Transcript | DPOGS209813-TA | 558 bp |
| Protein | DPOGS209813-PA | 185 aa |
| Genomic position | DPSCF300117 + 80599-82173 | |
| RNAseq coverage | 272x (Rank: top 40%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006762 | 3e-55 | 57.58% | |
| Bombyx | BGIBMGA007987-TA | 2e-54 | 52.41% | |
| Drosophila | PGRP-SA-PA | 9e-34 | 40.61% | |
| EBI UniRef50 | UniRef50_Q8WSZ1 | 4e-52 | 54.34% | Peptidoglycan recognition protein n=4 Tax=Obtectomera RepID=Q8WSZ1_BOMMO |
| NCBI RefSeq | NP_001037560.1 | 9e-53 | 54.34% | peptidoglycan recognition protein S2 [Bombyx mori] |
| NCBI nr blastp | gi|112982725 | 1e-51 | 54.34% | peptidoglycan recognition protein S2 precursor [Bombyx mori] |
| NCBI nr blastx | gi|112982725 | 2e-51 | 52.94% | peptidoglycan recognition protein S2 precursor [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0008745 | 8.2e-55 | N-acetylmuramoyl-L-alanine amidase activity | |
| GO:0009253 | 8.2e-55 | peptidoglycan catabolic process | ||
| GO:0008270 | 2.5e-50 | zinc ion binding | ||
| KEGG pathway | ||||
| InterPro domain | [1-184] IPR017331 | 1.2e-78 | Peptidoglycan recognition protein, PGRP-S | |
| [13-181] IPR002502 | 8.2e-55 | N-acetylmuramoyl-L-alanine amidase domain | ||
| [19-182] IPR015510 | 3.6e-52 | Peptidoglycan recognition protein | ||
| [18-159] IPR006619 | 2.5e-50 | Peptidoglycan recognition protein family domain, metazoa/bacteria | ||
| Orthology group | MCL21171 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209813-TA
ATGCTGTTTTTGTGGGTTTTTGCTGCAATATTTTCTTTAGTTTCTTCGGATTGTAATGTTGTGCCCATAGAAGAATGGAGCGGTTCAAATTCAAACCGAGTGGAGAAACTGCCAAAACCAGTAAATCTAGTAATCATCCAACACACTGTTACCACCCAATGCTTTACCGATACAGATTGTAACAAAATAATTAATGTCATTAGAAACTATCACTTAAATGATAGGGGTTTCACGGATATTGCGATGTCATTCCTAGTTGGAGGGAACGGTAAAATATATGAGGGTGCAGGTTGGCACGTTGGTTCTCACACTCGAGGTTACAATAACAGATCCATTTCTTTATCTTTCATTGGGGACTTCAGAACAAAATTACCAAGCACTGAAGCACTGCAAGCAGCGATTGATTTTCTGAATTGTGCATTTTATAAAAATTATTTAACCATGGACTATAGTTTAGTAGGAACTCAGCAACTTATACCAACTTTAAGTCCTGGAGAAAAATTGCAAAGTCTGATAAAGACTTGGCCTCATTGGAAAGAAGATGTTAGTCAACTTTAA
>DPOGS209813-PA
MLFLWVFAAIFSLVSSDCNVVPIEEWSGSNSNRVEKLPKPVNLVIIQHTVTTQCFTDTDCNKIINVIRNYHLNDRGFTDIAMSFLVGGNGKIYEGAGWHVGSHTRGYNNRSISLSFIGDFRTKLPSTEALQAAIDFLNCAFYKNYLTMDYSLVGTQQLIPTLSPGEKLQSLIKTWPHWKEDVSQL-