| DPOGS209814 | ||
|---|---|---|
| Transcript | DPOGS209814-TA | 537 bp |
| Protein | DPOGS209814-PA | 178 aa |
| Genomic position | DPSCF300117 + 105709-107931 | |
| RNAseq coverage | 2015x (Rank: top 6%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006763 | 4e-75 | 76.33% | |
| Bombyx | BGIBMGA008038-TA | 2e-66 | 66.07% | |
| Drosophila | PGRP-SA-PA | 8e-42 | 48.75% | |
| EBI UniRef50 | UniRef50_O76537 | 2e-67 | 69.14% | Peptidoglycan recognition protein n=4 Tax=Obtectomera RepID=PGRP_TRINI |
| NCBI RefSeq | NP_001036836.1 | 9e-65 | 66.07% | peptidoglycan recognition protein precursor [Bombyx mori] |
| NCBI nr blastp | gi|18202160 | 6e-67 | 69.14% | peptidoglycan recognition protein precursor [Trichoplusia ni] |
| NCBI nr blastx | gi|18202160 | 2e-67 | 69.14% | peptidoglycan recognition protein precursor [Trichoplusia ni] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0008745 | 9.6e-75 | N-acetylmuramoyl-L-alanine amidase activity | |
| GO:0008270 | 9.6e-75 | zinc ion binding | ||
| GO:0009253 | 9.6e-75 | peptidoglycan catabolic process | ||
| KEGG pathway | ||||
| InterPro domain | [1-175] IPR017331 | 8.8e-99 | Peptidoglycan recognition protein, PGRP-S | |
| [8-150] IPR006619 | 9.6e-75 | Peptidoglycan recognition protein family domain, metazoa/bacteria | ||
| [11-173] IPR015510 | 1.1e-70 | Peptidoglycan recognition protein | ||
| [10-172] IPR002502 | 2.2e-67 | N-acetylmuramoyl-L-alanine amidase domain | ||
| Orthology group | MCL16319 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209814-TA
ATGGACGCTTACGTGGATTTTAGCTGCTTCGTAACAAAGGAAGAATGGGATGGATTGCCTCCCTTGCACGTAGACTATCTTCCCAGACCAGTGGACTTGGTTATCATACAGCATACAGTGACATCTACTTGTAGCACATTCGAGTCATGCAAAAATATCGTTCAGAGTATACAGAATACCCATATGGAAGACCTTAAGTTTTGGGATATTGGAATGTCATTTTTGGTTGGCGGTGATGGCAAAGTTTACGAAGGTTCTGGTTGGCTACACGTTGGTGCACATACATTCGGATACAATAAAAAATCCATAGGCATATCATTCATAGGAAACTTTAACAACGATGAACCAACACCACAGGCGATAGCTGCAGCCCAAACTCTTCTAAGATGTGGCGTGGAAGAAGGACATCTATCTCCATACTACCACCTAGTAGGCCATAGACAACTCATTGCCACGGAAAGCCCCGGACGGAAATTGTATAGAGAAATTAGAACCTGGCCCCATTACCTGGAAGATGTATCATCGATAAAAAATTAA
>DPOGS209814-PA
MDAYVDFSCFVTKEEWDGLPPLHVDYLPRPVDLVIIQHTVTSTCSTFESCKNIVQSIQNTHMEDLKFWDIGMSFLVGGDGKVYEGSGWLHVGAHTFGYNKKSIGISFIGNFNNDEPTPQAIAAAQTLLRCGVEEGHLSPYYHLVGHRQLIATESPGRKLYREIRTWPHYLEDVSSIKN-