| DPOGS209827 | ||
|---|---|---|
| Transcript | DPOGS209827-TA | 564 bp |
| Protein | DPOGS209827-PA | 187 aa |
| Genomic position | DPSCF300117 + 623100-623663 | |
| RNAseq coverage | 1448x (Rank: top 9%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006584 | 7e-33 | 46.75% | |
| Bombyx | BGIBMGA008050-TA | 6e-95 | 85.56% | |
| Drosophila | Chd64-PB | 2e-73 | 67.02% | |
| EBI UniRef50 | UniRef50_Q9VZI1 | 2e-71 | 67.02% | Calponin-like protein Chd64 n=29 Tax=Bilateria RepID=Q9VZI1_DROME |
| NCBI RefSeq | NP_001040372.1 | 8e-78 | 72.87% | transgelin [Bombyx mori] |
| NCBI nr blastp | gi|304651502 | 7e-91 | 85.03% | calponin [Helicoverpa armigera] |
| NCBI nr blastx | gi|304651502 | 3e-88 | 85.03% | calponin [Helicoverpa armigera] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005515 | 5.7e-51 | protein binding | |
| KEGG pathway | mgl:MGL_4139 | 1e-10 | ||
| K05767 (IQGAP) | maps-> | Regulation of actin cytoskeleton | ||
| InterPro domain | [18-174] IPR001715 | 5.7e-51 | Calponin homology domain | |
| [4-18] IPR003096 | 8.1e-23 | Smooth muscle protein/calponin | ||
| Orthology group | MCL22174 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209827-TA
ATGGCTGAATACCGCGCAGGGAAAGCAGGCATCAACGCTGAGGCTCAGGAGAGGATAAACAGTAAATACAACAATGACATAGCCCATGAGACGTTAGAGTGGATCAAGAAAATCACCGGGGAACCGGAGAACACGTCCGGTGATGCGGAGAATCTTTACGAGGTGCTCAAAGATGGTACCTTACTTTGTAATCTAGTTAACAAATTCCAAGAAGGCGCCGTCAAAAAAATTAATAAATCCAACATGGCTTTCAAGTGTATGGAGAATATCAACGCTTTTCTTGAAGCCGTCGTCAAGTTGGGAGTTCCATCCCAAGAGACATTCCAGACGATCGATCTATGGGAGAAGCAGAACCTTTACTCTGTAGTTGTATGCCTGCAATCATTAGGCAGGAAAGCTGGAAATTTCGGTCTACCGTCCATGGGACCAAAGGAAGCAGAGAAAAATATAAGAGAGTTCAGTGAAGAACAACTACGAGCTGGTCAGAATGTAGTTTCCTTGCAGTACGGAACCAACAAAGGACAACAATCCGGCATCTCGTTCGGTAACAGGCGTCAGATGTGA
>DPOGS209827-PA
MAEYRAGKAGINAEAQERINSKYNNDIAHETLEWIKKITGEPENTSGDAENLYEVLKDGTLLCNLVNKFQEGAVKKINKSNMAFKCMENINAFLEAVVKLGVPSQETFQTIDLWEKQNLYSVVVCLQSLGRKAGNFGLPSMGPKEAEKNIREFSEEQLRAGQNVVSLQYGTNKGQQSGISFGNRRQM-