| DPOGS209903 | ||
|---|---|---|
| Transcript | DPOGS209903-TA | 699 bp |
| Protein | DPOGS209903-PA | 232 aa |
| Genomic position | DPSCF300049 + 435001-435699 | |
| RNAseq coverage | 943x (Rank: top 14%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL011848 | 2e-131 | 94.40% | |
| Bombyx | BGIBMGA000201-TA | 1e-129 | 92.67% | |
| Drosophila | Pros26-PA | 8e-86 | 62.45% | |
| EBI UniRef50 | UniRef50_D3TQD0 | 9e-88 | 65.65% | 20S proteasome regulatory subunit beta type PSMB1/PRE7 n=1 Tax=Glossina morsitans morsitans RepID=D3TQD0_GLOMM |
| NCBI RefSeq | NP_001093092.1 | 4e-128 | 92.67% | proteasome beta subunit [Bombyx mori] |
| NCBI nr blastp | gi|211939905 | 7e-128 | 93.53% | proteasome subunit beta 1 [Helicoverpa armigera] |
| NCBI nr blastx | gi|211939905 | 5e-123 | 93.53% | proteasome subunit beta 1 [Helicoverpa armigera] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0051603 | 3.2e-34 | proteolysis involved in cellular protein catabolic process | |
| GO:0004298 | 3.2e-34 | threonine-type endopeptidase activity | ||
| GO:0005839 | 3.2e-34 | proteasome core complex | ||
| KEGG pathway | tca:657294 | 3e-102 | ||
| K02732 (PSMB1) | maps-> | Proteasome | ||
| InterPro domain | [26-217] IPR001353 | 3.2e-34 | Proteasome, subunit alpha/beta | |
| Orthology group | MCL14278 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209903-TA
ATGTTAAGTTTAAATGAAAATTTTCCTGAGTATGCCGTTCCCGGAGCCAAACAAGTTCGCTTCGAACCCTATGCTGACAACGGAGGCAGCGTTGTAGCAATTGCCGGTGATGACTACGCTGTAATTGGAGCCGATACTCGTCTAAGCACTGGTTTTTCGATATATACAAGAGAACAAAAGAAGCTCTTTAAACTCTCCGACCGCACTGTTCTTGGGGCTACAGGCTGCTGGTGCGACACATTAACACTCACCCGTCTTTTGCAAGCTCGTATGCAGATGTACGAGCATGAACATAACAAAGCCATGTCAACACCAGCGGTAGCTCAAATGTTGTCAACTATGTTGTATTACAAGAGATTTTTCCCTTACTATATCTCTAATGTACTAGCTGGCTTGGATGCTGAAGGAAAAGGATGTGTTTACAGCTACGACCCTATCGGTCATTGTGAGAGATCAAACTACCGCGCGGGAGGATCTGCTGGAGCTCAGCTACAACCCTTACTGGACAATCAAATAGGACTTAAAAATATGCAGAATGTCACTGAGGCACCTCTATCCAGGGAAAAAGCTCTGGCGCTTCTTAAAGATGTTTTTATAAGTGCAGCTGAGCGTGACATCTATACTGGAGACAGTATCTACATACTCATCATCACCGCTAATGGTATTCAGGAGGAAAAGTTTGAACTTCGTAAAGATTAA
>DPOGS209903-PA
MLSLNENFPEYAVPGAKQVRFEPYADNGGSVVAIAGDDYAVIGADTRLSTGFSIYTREQKKLFKLSDRTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKAMSTPAVAQMLSTMLYYKRFFPYYISNVLAGLDAEGKGCVYSYDPIGHCERSNYRAGGSAGAQLQPLLDNQIGLKNMQNVTEAPLSREKALALLKDVFISAAERDIYTGDSIYILIITANGIQEEKFELRKD-