DPOGS209911 | ||
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Transcript | DPOGS209911-TA | 675 bp |
Protein | DPOGS209911-PA | 224 aa |
Genomic position | DPSCF300049 + 693185-693859 | |
RNAseq coverage | 387x (Rank: top 31%) |
Annotation | ||||
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Heliconius | HMEL008012 | 6e-38 | 88.10% |   |
Bombyx | BGIBMGA004151-TA | 3e-97 | 85.09% |   |
Drosophila | Sox14-PA | 1e-29 | 70.27% |   |
EBI UniRef50 | UniRef50_D6WQB9 | 2e-43 | 43.40% | Putative uncharacterized protein n=2 Tax=Tribolium castaneum RepID=D6WQB9_TRICA |
NCBI RefSeq | XP_973116.1 | 3e-44 | 43.40% | PREDICTED: similar to Putative transcription factor SOX-14 [Tribolium castaneum] |
NCBI nr blastp | gi|91086963 | 6e-43 | 43.40% | PREDICTED: similar to Putative transcription factor SOX-14 [Tribolium castaneum] |
NCBI nr blastx | gi|270009646 | 4e-48 | 46.36% | hypothetical protein TcasGA2_TC008936 [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0003677 | 1.2e-28 | DNA binding | |
GO:0005515 | 1.9e-25 | protein binding | ||
KEGG pathway |   | |||
InterPro domain | [1-74] IPR000910 | 1.2e-28 | High mobility group, HMG1/HMG2 | |
[1-69] IPR009071 | 1.9e-25 | High mobility group, superfamily | ||
Orthology group | MCL18287 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS209911-TA
ATGAATGCGTTTATGGTTTGGTCTCAAATCGAACGCAGAAAAATTTGCGAACAAACTCCAGATATGCATAATGCAGAAATTTCTAAGAACTTAGGGCGAGTTTGGAAAACGCTAAACGATGAGGAAAGGCAGCCTTTTATAGATGAAGCAGAAAGGCTGAGACAACTGCATATGCGCGAGTACCCTGATTATAAATATAGGCCTCGCAAGAAAACAGCAAAACCTGCACAAAGAAGTGGTGCAATAACCAAGCAGAAGCGTAAACAAAGAGCTGACAGTAACAACAACAGAGGTGTATCCAGACGGAGAACGCGGACGGTCCCAAGCATCTCCAGTGTTCCAATGGAAACGCCAGCTCCTCCACCACTGCCAGCATCCCCAGCGGGATCGCCGGATTCTCCTGAATCTGCGTGTTTCTACGACGATAACACGAAACGCGATCAATCAGACCTAACTGAACTTTATTCAATTACGGATTTATTTACGTTACCAGCAGACTGTGAAGTTGATCTAGACGCGTTGACGGAAATGGAGGACTTTGAGACGGCATCTTCTTCGTCAGGATCACACTTTGAGTTCTCATGCACGCCGGACGTGTCTGATATGCTCAGTGAGATTGGCGTAGCAGGGGATTGGGATGACCCTACTTTCTCATCGTACCTTACGTCGTCTTAA
>DPOGS209911-PA
MNAFMVWSQIERRKICEQTPDMHNAEISKNLGRVWKTLNDEERQPFIDEAERLRQLHMREYPDYKYRPRKKTAKPAQRSGAITKQKRKQRADSNNNRGVSRRRTRTVPSISSVPMETPAPPPLPASPAGSPDSPESACFYDDNTKRDQSDLTELYSITDLFTLPADCEVDLDALTEMEDFETASSSSGSHFEFSCTPDVSDMLSEIGVAGDWDDPTFSSYLTSS-