Monarch geneset OGS2.0

DPOGS209929
TranscriptDPOGS209929-TA1923 bp
ProteinDPOGS209929-PA640 aa
Genomic positionDPSCF300180 + 90179-95267
RNAseq coverage837x (Rank: top 15%)
Annotation
HeliconiusHMEL0167511e-6786.47% 
BombyxBGIBMGA010941-TA0.075.89% 
DrosophilaSrp72-PA1e-12643.97% 
EBI UniRef50UniRef50_E0VYM31e-13944.37%Signal recognition particle 72 kDa protein, putative n=5 Tax=Neoptera RepID=E0VYM3_PEDHC
NCBI RefSeqXP_001868374.16e-14546.62%signal recognition particle 72 kDa protein [Culex quinquefasciatus]
NCBI nr blastpgi|1700671681e-14346.62%signal recognition particle 72 kDa protein [Culex quinquefasciatus]
NCBI nr blastxgi|3504053433e-15247.30%PREDICTED: signal recognition particle 72 kDa protein-like isoform 1 [Bombus impatiens]
Group
Gene OntologyGO:00066141.8e-13SRP-dependent cotranslational protein targeting to membrane
GO:00485001.8e-13signal recognition particle
GO:00083121.8e-137S RNA binding
GO:00054887.5e-13binding
KEGG pathwaycqu:CpipJ_CPIJ0179022e-144 
 K03108 (SRP72)maps-> Protein export
InterPro domain[517-579] IPR0136991.8e-13Signal recognition particle, SRP72 subunit, RNA-binding
[8-140] IPR0119907.5e-13Tetratricopeptide-like helical
Orthology groupMCL15170 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS209929-TA
ATGTCAGCCAACAAGGAAAATAACCTTGTTCAGGCTTATATAGAATTAAATAAGTTTTGCCAAAATGGAGACTACGAAAGAGCATTGAAGGCTGCAGGGAAAGTCCTGCAAATATCTCCGAACGAACAAAAAGCATTTCACTGTAAAGTTGTGTGCTTCATACATTTGCACAACTTTAAAGAGGCTTTATCTGTCCTCTGCAACCCCAAGAATGCGGCGTTGGCAGCTGATCTGGTGTTCGAGAAGGCTTACTCTCAATACCGACTGAACTGTCCAAAAGATGCCTTGGACACTGTGGATAGTGCGCCTGAGTTAACACCAGCATTAAAAGAACTTAGAGCTCAAATCTTATACCGACTGGAACAATACCAGGAGTGCTTCAACCTTTACCGTGATATAGTCAAGAATACTGACGACGACTATGAAGATGAGAGGAAGGCCAACTTGTCAGCCGTGGTCGCAAATCTGGCTGCTATCAATCCATCGGCAGATCTTCCGACATTCGAAGAAAATACCTACGAACTATCATATAACTCGGGAACCACTTTAGTCATGCGCGGCAAGTACAATGAAGCGTTATCAGTGCTGAAGAAGGCCGAACAAGGGTGTTCGGAAAGCATTATTGATGACGGAGGTACAGAGGAAGAAGCTAAGGAAGAAGCTGCTATTATATGGGTCCAGCAAGCATTCTGCCAACAACAAATGGGCAAGGAAAAGGAAGCGGCGGCCTTATACCATAATGTTCTTAAAGATAAACCCAGCGACCAAGCCCTGGTCGCTATCGCCAGCAACAACCTAGTAGTAATCAATCGTGACACCAATGTATTTGATTCTCGCAAACGTATGAAGGCTGCAACTCAAGATGGCCTGGAGCACAAGCTTACCTCAAGACAACGTGCCTCTATTGCCTACAACCAAGCACTACTTGCTATATATTCTAATCAGCCGGACTTCTGCAAGCAATGCTGTGTGAAACTCAACCGTGAGTTCAGACAAGATCATCGGGCAACGCTCGTCGAAGCTGCCTCACTTCACAAGGAAGGGAAAAGACAGCAGGCTATCACTCTGCTGTTGAAGAGTGGGGGCGTACTCGTTCTGGCTGCAGTACAGATCATGTTGGCACAAGGTGATCGGAAAGGTGTTGTCAAGTTGTTGGAAGATAGTGAATTTAAATACAAACCAGCCGTCATTGGTCTTCTATACACCCTGCTGGCCGCGGATAATGAATATGAGAAGGCTTCTCAGATGTTCACCGATGTCTACGAACATTACAAGAACGATGATGAGGCGATGTCCGCACTGCGCGGTGTGTGGCGGGCGGCTGCGGAAGTTCACACTCGAGCCGGGGACGCCGCCCGCGCGGCCCTCGCGCACGAGGCGTTAGCGCGGGCAGCGCCGCAGGACAAGCGTAGTCTCGCACGACTCGTGAAGGCGCTCCGCGGAGACCCCGCCAGGGCGAAGGCCCTCGCTGAAGCCCTACCACCTATATCAGAGCTTGAGTGTAAAATAGACGTGGATGCTCTGGAGTCCTCTAAGTGGATGATGGGTGCCAAGGTCGTCAAGAAAACTGTACAGAGCAAACAGGAACAATCGCCAGGCACTCCTGGTTCCGAGCTGGGGCAGAAGACTAAACCGAAACGTAAACGTAAGACCAAGCTACCACCTAATGCTGACCTCTCTAGACCCCCGGATCCGGAAAGATGGCTGCCCAAGTACGAGCGCACGGCGTACCGCAAGCGTCGCGGCGTGAGGCGTGACGTCATCAAGGGCAGTCAAGGACTTACCACCGCTGCCGTTGATCAGTACGACATGAGCAAACAGACTCCTAGTACCGCCACCAAGTCACCTCGTGTGGAAGTGAAGGCCACGGAGACCTGGACGAGGAAGCAACAGAAGAAGAAGGGCAAGGGGCGGAAATGGTGA

Protein sequence:

>DPOGS209929-PA
MSANKENNLVQAYIELNKFCQNGDYERALKAAGKVLQISPNEQKAFHCKVVCFIHLHNFKEALSVLCNPKNAALAADLVFEKAYSQYRLNCPKDALDTVDSAPELTPALKELRAQILYRLEQYQECFNLYRDIVKNTDDDYEDERKANLSAVVANLAAINPSADLPTFEENTYELSYNSGTTLVMRGKYNEALSVLKKAEQGCSESIIDDGGTEEEAKEEAAIIWVQQAFCQQQMGKEKEAAALYHNVLKDKPSDQALVAIASNNLVVINRDTNVFDSRKRMKAATQDGLEHKLTSRQRASIAYNQALLAIYSNQPDFCKQCCVKLNREFRQDHRATLVEAASLHKEGKRQQAITLLLKSGGVLVLAAVQIMLAQGDRKGVVKLLEDSEFKYKPAVIGLLYTLLAADNEYEKASQMFTDVYEHYKNDDEAMSALRGVWRAAAEVHTRAGDAARAALAHEALARAAPQDKRSLARLVKALRGDPARAKALAEALPPISELECKIDVDALESSKWMMGAKVVKKTVQSKQEQSPGTPGSELGQKTKPKRKRKTKLPPNADLSRPPDPERWLPKYERTAYRKRRGVRRDVIKGSQGLTTAAVDQYDMSKQTPSTATKSPRVEVKATETWTRKQQKKKGKGRKW-