| DPOGS210018 | ||
|---|---|---|
| Transcript | DPOGS210018-TA | 582 bp |
| Protein | DPOGS210018-PA | 193 aa |
| Genomic position | DPSCF300327 + 143903-144803 | |
| RNAseq coverage | 683x (Rank: top 19%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | % | |||
| Bombyx | % | |||
| Drosophila | mRpL49-PA | 2e-32 | 43.24% | |
| EBI UniRef50 | UniRef50_Q9VYI3 | 2e-30 | 43.24% | Probable 39S ribosomal protein L49, mitochondrial n=10 Tax=Drosophila RepID=RM49_DROME |
| NCBI RefSeq | XP_002100400.1 | 2e-32 | 44.59% | GE17031 [Drosophila yakuba] |
| NCBI nr blastp | gi|195478077 | 3e-31 | 44.59% | GE17031 [Drosophila yakuba] |
| NCBI nr blastx | gi|195478077 | 2e-31 | 44.59% | GE17031 [Drosophila yakuba] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 1e-27 | ribosome | |
| GO:0006412 | 1e-27 | translation | ||
| GO:0005622 | 1e-27 | intracellular | ||
| GO:0003735 | 1e-27 | structural constituent of ribosome | ||
| KEGG pathway | ||||
| InterPro domain | [69-193] IPR007740 | 1e-27 | Ribosomal protein L49/IMG2 | |
| Orthology group | MCL15667 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210018-TA
ATGGCGACTGTGTGGCGTTCACAGTATGCGTTTGCACGTTTTTTTATTGGAAAAACCGTTCGGATCCTGAACAACGCCTCTGATTTGGGTGCACGACTTAAACCGGAGTCAATATCGATACCGTTCTCTAGAAAGTATTCCAACTACGCGTCCTCTCCGTTTGTTTCTAAAATCCAAGAGCAATATGAGTTTGAAATAGTAAAAAACCCCCCCGAGTGGGGGTACGTGGAGCGACTTCTGCCTTTAGAAACGGTTCCGCAGATAAAACCCAAAGAGTCTTATCCTTCAGGATGGATTGCACCAAAGGAGGAAGCAAAAAATTTACCATACTATATAGCCCGGAATAAAAATCATCAAATACCCATATATCTTGAAATAGGATACAGAGGCCAAAGAAAAATTACTAAAATAAAAAAAATTGAAGGCGACATCTGGTTGATGAACGACCTCATTAAGGATTATCTTAAAAATAAATGTAATCGTTACATAGAAACGAGAGTACACGAAATCGGTAAATTTATAGACGTAAAAGGAGATTATGTTAATATTTTAATAGATTGGGCCCATTCCCAAGGGTTTTAG
>DPOGS210018-PA
MATVWRSQYAFARFFIGKTVRILNNASDLGARLKPESISIPFSRKYSNYASSPFVSKIQEQYEFEIVKNPPEWGYVERLLPLETVPQIKPKESYPSGWIAPKEEAKNLPYYIARNKNHQIPIYLEIGYRGQRKITKIKKIEGDIWLMNDLIKDYLKNKCNRYIETRVHEIGKFIDVKGDYVNILIDWAHSQGF-